@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00433_KPCB_R: (2014-09-07 )
MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKARDKRDTSNFDKEFTRQPVELTPTDKLFIMNLDQNEFAGFSYTNPEFVINV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ANP_A_3(1O6K)
AKT2_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




ANP_A_3(1O6L)
AKT2_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




ATP_A_3(3A8W)
KPCI_HUMAN
[Raw transfer]




ANP_A_7(1CDK)
KAPCA_PIG
[Raw transfer]




X39_A_3(2X39)
AKT2_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




L20_A_3(2JDR)
AKT2_HUMAN
[Raw transfer]




GVP_A_3(2UW9)
AKT2_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




G95_A_5(3E87)
AKT2_HUMAN
[Raw transfer]




X37_A_3(2XH5)
AKT2_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




I5S_A_3(2JDO)
AKT2_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




ANP_A_7(3PFQ)
KPCB_RAT
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




C58_A_9(3ZH8)
KPCI_HUMAN
[Raw transfer]




5FI_A_2(4L3J)
KS6B1_HUMAN
[Raw transfer]




5FI_A_2(4L42)
KS6B1_HUMAN
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




EDO_A_4(2JDO)
AKT2_HUMAN
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




CHAIN_C_2(2X39)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2XH5)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_3(3E87)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2UW9)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2JDR)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_Z_2(4DC2)
KPCI_MOUSE
[Raw transfer]

-

CHAIN_Z_2(4DC2)
KPCI_MOUSE
[Raw transfer]

-

CHAIN_C_2(1O6L)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(1O6K)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2JDO)
AKT2_HUMAN
[Raw transfer]

-

1 PsiBlast_PDB 97.0095%-106 - C1 -3PFQ 3.8 KPCB_RAT
39 HHSearch 56.1558%-116 - C1 -1XJD 7.8
8 PsiBlast_PDB 55.0250%-106 - C1 -3A8W 6.6 KPCI_HUMAN
41 HHSearch 54.6251%-101 - C1 -4DC2 4.5 KPCI_MOUSE
20 PsiBlast_PDB 53.5846%-104 - C1 -3E87 6.3 AKT2_HUMAN
16 PsiBlast_PDB 53.5846%-103 - C1 -2JDR 8.7 AKT2_HUMAN
38 HHSearch 53.3158%-103 - C1 -3TXO 6.6 KPCL_HUMAN
13 PsiBlast_PDB 53.2146%-102 - C1 -1O6K 6.5 AKT2_HUMAN
10 PsiBlast_PDB 53.1950%-105 - C1 -3ZH8 6.9 KPCI_HUMAN
15 PsiBlast_PDB 53.0746%-105 - C1 -2JDO 5.6 AKT2_HUMAN
14 PsiBlast_PDB 53.0646%-105 - C1 -1O6L 6.5 AKT2_HUMAN
40 HHSearch 52.9246%-101 * C1 *4GV1 7.4 AKT1_HUMAN
18 PsiBlast_PDB 52.6646%-104 - C1 -2X39 7.2 AKT2_HUMAN
19 PsiBlast_PDB 52.3746%-105 - C1 -2XH5 8.2 AKT2_HUMAN
17 PsiBlast_PDB 52.2946%-104 - C1 -2UW9 6.4 AKT2_HUMAN
48 HHSearch 51.8039% -93 - C1 -1RDQ 7.2 KAPCA_MOUSE
45 HHSearch 48.0240%-103 - C1 -4L42 7.7 KS6B1_HUMAN
42 HHSearch 46.1745%-112 - C1 -2R5T 6.2 SGK1_HUMAN
44 HHSearch 45.8236% -90 - C1 -4AW2 3.0 MRCKA_RAT
57 HHSearch 45.5740% -99 - C1 -4L3J 7.8 KS6B1_HUMAN
49 HHSearch 45.0237% -88 - C1 -3C4Z 6.1 RK_BOVIN
32 Fugue 40.9137% -72 - C1 -1CDK 4.6 KAPCA_PIG