@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00433_KPCD_M: (2014-09-07 )
MAPFLRISFNSYELGSLQVEDEASQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKTTFDAHIYEGRVIQIVLMRAAEDPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVLMCVQYFLEDGDCKQSMRSEEEAKFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTATNSRDTIFQKERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRSSRKLDTTESVGIYQGFEKKPEVSGSDILDNNGTYGKIWEGSTRCTLENFTFQKVLGKGSFGKVLLAELKGKDKYFAIKCLKKDVVLIDDDVECTMVEKRVLALAWESPFLTHLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENIFGEGRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPDKRLGVTGNIRIHPFFKTINWSLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQEAFHGFSFVNPKFEQFLDI

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ANP_A_3(1O6L)
AKT2_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




X39_A_3(2X39)
AKT2_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




ATP_A_3(3A8W)
KPCI_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




L20_A_3(2JDR)
AKT2_HUMAN
[Raw transfer]




GVP_A_3(2UW9)
AKT2_HUMAN
[Raw transfer]




I5S_A_3(2JDO)
AKT2_HUMAN
[Raw transfer]




X37_A_3(2XH5)
AKT2_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




ANP_A_7(3PFQ)
KPCB_RAT
[Raw transfer]




5FI_A_2(4L3J)
KS6B1_HUMAN
[Raw transfer]




5FI_A_2(4L42)
KS6B1_HUMAN
[Raw transfer]




C58_A_9(3ZH8)
KPCI_HUMAN
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




EDO_A_4(2JDO)
AKT2_HUMAN
[Raw transfer]




0R4_A_2(4EJN)
AKT1_HUMAN
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




CHAIN_C_2(2XH5)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2X39)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2UW9)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_Z_2(4DC2)
KPCI_MOUSE
[Raw transfer]

-

CHAIN_Z_2(4DC2)
KPCI_MOUSE
[Raw transfer]

-

CHAIN_C_2(1O6L)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2JDO)
AKT2_HUMAN
[Raw transfer]

-

CHAIN_C_2(2JDR)
AKT2_HUMAN
[Raw transfer]

-

32 HHSearch 89.0950% -94 - C2 -3PFQ 4.0 KPCB_RAT
33 HHSearch 76.5071%-119 - C2 -1XJD 8.1
36 HHSearch 72.6645%-112 - C2 -4GV1 7.5 AKT1_HUMAN
16 PsiBlast_PDB 71.7742%-116 - C2 -2X39 7.2 AKT2_HUMAN
37 HHSearch 71.6845%-108 - C2 -4DC2 5.7 KPCI_MOUSE
12 PsiBlast_PDB 71.0642%-116 - C2 -1O6L 6.6 AKT2_HUMAN
13 PsiBlast_PDB 71.0242%-114 - C2 -2JDO 5.8 AKT2_HUMAN
9 PsiBlast_PDB 70.9844%-109 - C2 -3A8W 6.7 KPCI_HUMAN
15 PsiBlast_PDB 70.9742%-113 - C2 -2UW9 6.5 AKT2_HUMAN
35 HHSearch 70.3656%-106 - C2 -3TXO 6.6 KPCL_HUMAN
17 PsiBlast_PDB 70.1042%-113 - C2 -2XH5 8.3 AKT2_HUMAN
14 PsiBlast_PDB 69.7442%-114 - C2 -2JDR 8.8 AKT2_HUMAN
8 PsiBlast_PDB 67.2144%-105 - C2 -3ZH8 6.6 KPCI_HUMAN
18 PsiBlast_PDB 65.7347%-113 - C2 -4EJN 6.7 AKT1_HUMAN
45 HHSearch 64.1038%-101 - C2 -3C4Z 6.2 RK_BOVIN
42 HHSearch 63.4641%-112 - C2 -4L42 7.7 KS6B1_HUMAN
44 HHSearch 62.7639% -91 - C2 -1RDQ 7.2 KAPCA_MOUSE
41 HHSearch 61.3636% -95 - C2 -4AW2 2.3 MRCKA_RAT
38 HHSearch 58.3343%-119 - C2 -2R5T 6.3 SGK1_HUMAN
53 HHSearch 57.3543%-102 * C2 *4L3J 7.9 KS6B1_HUMAN
55 HHSearch 56.3242%-110 - C2 -3UBD 6.4 KS6A3_MOUSE
20 PsiBlast_PDB 55.3243%-112 - C2 -3HDM 7.0 SGK1_HUMAN