@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00439_BRD2_HUMAN: (2014-09-07 )
MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(4A9N)
BRD2_HUMAN
[Raw transfer]



S5B_A_5(4AKN)
BRD2_HUMAN
[Raw transfer]



A9O_C_10(4A9O)
BRD2_HUMAN
[Raw transfer]



A9P_B_9(4ALH)
BRD2_HUMAN
[Raw transfer]



S5B_B_8(4AKN)
BRD2_HUMAN
[Raw transfer]



A9O_A_5(4A9O)
BRD2_HUMAN
[Raw transfer]



A9P_C_11(4ALH)
BRD2_HUMAN
[Raw transfer]



A9N_A_7(4A9N)
BRD2_HUMAN
[Raw transfer]



A9P_A_6(4ALH)
BRD2_HUMAN
[Raw transfer]



A9O_B_9(4A9O)
BRD2_HUMAN
[Raw transfer]



TVP_A_6(4A9H)
BRD2_HUMAN
[Raw transfer]



A9N_B_12(4A9N)
BRD2_HUMAN
[Raw transfer]



TVP_C_9(4A9H)
BRD2_HUMAN
[Raw transfer]



3PF_B_9(4A9E)
BRD2_HUMAN
[Raw transfer]



3PF_A_4(4A9E)
BRD2_HUMAN
[Raw transfer]



TVP_B_8(4A9H)
BRD2_HUMAN
[Raw transfer]



P9I_A_4(4A9I)
BRD2_HUMAN
[Raw transfer]



3PF_C_12(4A9E)
BRD2_HUMAN
[Raw transfer]



P9M_B_7(4A9M)
BRD2_HUMAN
[Raw transfer]



P9M_A_4(4A9M)
BRD2_HUMAN
[Raw transfer]



P9M_C_8(4A9M)
BRD2_HUMAN
[Raw transfer]



73B_A_2(4BJX)
BRD4_HUMAN
[Raw transfer]



WSH_B_5(2YDW)
BRD2_HUMAN
[Raw transfer]



MB3_B_7(4A9F)
BRD2_HUMAN
[Raw transfer]



MB3_A_4(4A9F)
BRD2_HUMAN
[Raw transfer]



MB3_C_9(4A9F)
BRD2_HUMAN
[Raw transfer]



P9I_C_9(4A9I)
BRD2_HUMAN
[Raw transfer]



WSH_C_7(2YDW)
BRD2_HUMAN
[Raw transfer]



TYL_B_8(4A9J)
BRD2_HUMAN
[Raw transfer]



1GH_A_4(4ALG)
BRD2_HUMAN
[Raw transfer]



WSH_A_4(2YDW)
BRD2_HUMAN
[Raw transfer]



DMS_C_14(4A9N)
BRD2_HUMAN
[Raw transfer]



TYL_A_5(4A9J)
BRD2_HUMAN
[Raw transfer]



JQ1_A_2(3S91)
BRD3_HUMAN
[Raw transfer]



EAM_C_7(2YEK)
BRD2_HUMAN
[Raw transfer]



EAM_B_5(2YEK)
BRD2_HUMAN
[Raw transfer]



EAM_A_4(2YEK)
BRD2_HUMAN
[Raw transfer]



EDO_B_5(2NXB)
BRD3_HUMAN
[Raw transfer]



TYL_C_10(4A9J)
BRD2_HUMAN
[Raw transfer]



DMS_C_9(4AKN)
BRD2_HUMAN
[Raw transfer]



DTT_A_4(1X0J)
BRD2_HUMAN
[Raw transfer]



EDO_B_10(4A9E)
BRD2_HUMAN
[Raw transfer]



EDO_B_7(4A9J)
BRD2_HUMAN
[Raw transfer]



EDO_A_4(4A9J)
BRD2_HUMAN
[Raw transfer]



EDO_A_5(4A9E)
BRD2_HUMAN
[Raw transfer]



EDO_A_4(2NXB)
BRD3_HUMAN
[Raw transfer]



CHAIN_Q_5(2DVQ)
BRD2_HUMAN
[Raw transfer]
-
EDO_A_9(2NXB)
BRD3_HUMAN
[Raw transfer]



CHAIN_Q_5(2DVR)
BRD2_HUMAN
[Raw transfer]
-
CHAIN_P_4(2DVQ)
BRD2_HUMAN
[Raw transfer]
-
CHAIN_P_4(2DVR)
BRD2_HUMAN
[Raw transfer]
-
50 PsiBlast_CBE 79.6387% -95 - C6 -2NXB 2.9 BRD3_HUMAN
39 PsiBlast_CBE 79.6095%-113 - C6 -4AKN 7.0 BRD2_HUMAN
6 PsiBlast_PDB 79.3396%-104 - C6 -4A9M 6.2 BRD2_HUMAN
20 PsiBlast_PDB 78.9094% -99 - C6 -2DVR 5.1 BRD2_HUMAN
19 PsiBlast_PDB 78.7494% -96 - C6 -2DVQ 5.2 BRD2_HUMAN
7 PsiBlast_PDB 78.5796%-102 - C6 -4A9N 5.9 BRD2_HUMAN
28 PsiBlast_CBE 78.5696%-102 - C6 -4A9M 6.0 BRD2_HUMAN
13 PsiBlast_PDB 77.9595%-100 - C6 -4AKN 6.9 BRD2_HUMAN
5 PsiBlast_PDB 77.6196%-104 - C6 -4A9J 2.9 BRD2_HUMAN
1 PsiBlast_PDB 76.9296%-101 - C6 -4A9E 4.0 BRD2_HUMAN
48 PsiBlast_CBE 76.6381% -83 - C6 -4BJX 8.4 BRD4_HUMAN
3 PsiBlast_PDB 76.4896%-100 - C6 -4A9H 5.0 BRD2_HUMAN
18 PsiBlast_PDB 76.4694% -97 - C6 -1X0J 2.2 BRD2_HUMAN
33 PsiBlast_CBE 75.9696%-116 - C6 -4A9H 5.0 BRD2_HUMAN
24 PsiBlast_CBE 75.7496%-113 - C6 -4A9O 4.8 BRD2_HUMAN
22 PsiBlast_CBE 75.6496%-111 - C6 -4ALH 4.7 BRD2_HUMAN
11 PsiBlast_PDB 75.1795%-106 - C6 -2YDW 7.7 BRD2_HUMAN
35 PsiBlast_CBE 75.1696%-105 - C6 -4A9F 2.7 BRD2_HUMAN
37 PsiBlast_CBE 75.0396% -98 - C6 -4A9E 4.2 BRD2_HUMAN
30 PsiBlast_CBE 74.8496%-102 - C6 -4A9J 2.7 BRD2_HUMAN
12 PsiBlast_PDB 74.7895%-102 - C6 -2YEK 7.5 BRD2_HUMAN
26 PsiBlast_CBE 74.6496% -99 - C6 -4A9N 6.0 BRD2_HUMAN
2 PsiBlast_PDB 74.4296%-114 - C6 -4A9F 2.7 BRD2_HUMAN
9 PsiBlast_PDB 74.3596%-112 - C6 -4ALH 4.5 BRD2_HUMAN
40 PsiBlast_CBE 74.3295%-111 - C6 -2YEK 7.7 BRD2_HUMAN
10 PsiBlast_PDB 74.1696%-104 - C6 -4ALG 7.6 BRD2_HUMAN
8 PsiBlast_PDB 74.1096% -98 - C6 -4A9O 4.7 BRD2_HUMAN
25 PsiBlast_CBE 73.6396%-111 - C6 -4A9N 3.6 BRD2_HUMAN
21 PsiBlast_CBE 73.6296%-108 - C6 -4ALH 4.2 BRD2_HUMAN
49 PsiBlast_CBE 73.6087%-115 * C6 *3S91 8.4 BRD3_HUMAN
32 PsiBlast_CBE 73.4796%-110 - C6 -4A9H 4.8 BRD2_HUMAN
4 PsiBlast_PDB 73.4496%-106 - C6 -4A9I 5.0 BRD2_HUMAN
23 PsiBlast_CBE 73.4196%-111 - C6 -4A9O 4.4 BRD2_HUMAN
41 PsiBlast_CBE 72.9395%-118 - C6 -2YEK 7.6 BRD2_HUMAN
29 PsiBlast_CBE 72.6796%-111 - C6 -4A9J 3.0 BRD2_HUMAN
27 PsiBlast_CBE 72.4896%-113 - C6 -4A9M 6.4 BRD2_HUMAN
34 PsiBlast_CBE 72.3196%-110 - C6 -4A9F 2.6 BRD2_HUMAN
31 PsiBlast_CBE 72.1796%-112 - C6 -4A9I 5.2 BRD2_HUMAN
36 PsiBlast_CBE 72.1696%-109 - C6 -4A9E 3.5 BRD2_HUMAN
43 PsiBlast_CBE 72.0895%-108 - C6 -2YDW 8.1 BRD2_HUMAN
38 PsiBlast_CBE 72.0195%-110 - C6 -4AKN 3.4 BRD2_HUMAN
51 PsiBlast_CBE 71.3887%-107 - C6 -2NXB 2.1 BRD3_HUMAN
42 PsiBlast_CBE 71.2195%-112 - C6 -2YDW 8.7 BRD2_HUMAN