@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00439_BRDT_H: (2014-09-07 )
MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQLNSRKRQTKSDKTQPSKAVENVSRLSESSSSSSSSSESESSSSDLSSSDSSDSESEMFPKFTEVKPNDSPSKENVKKMKNECIPPEGRTGVTQIGYCVQDTTSANTTLVHQTTPSHVMPPNHHQLAFNYQELEHLQTVKNISPLQILPPSGDSEQLSNGITVMHPSGDSDTTMLESECQAPVQKDIKIKNADSWKSLGKPVKPSGVMKSSDELFNQFRKAAIEKEVKARTQELIRKHLEQNTKELKASQENQRDLGNGLTVESFSNKIQNKCSGEEQKEHQQSSEAQDKSKLWLLKDRDLARQKEQERRRREAMVGTIDMTLQSDIMTMFENNFD

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_3(3P5O)
BRD4_HUMAN
[Raw transfer]



1H2_A_6(4J0R)
BRD4_HUMAN
[Raw transfer]



1H3_A_6(4J0S)
BRD4_HUMAN
[Raw transfer]



WSH_A_3(2YEL)
BRD4_HUMAN
[Raw transfer]



1GH_A_7(3ZYU)
BRD4_HUMAN
[Raw transfer]



UTH_A_3(4BW2)
BRD4_HUMAN
[Raw transfer]



S5B_A_5(4BW1)
BRD4_HUMAN
[Raw transfer]



14X_A_2(4HBX)
BRD4_HUMAN
[Raw transfer]



0Q1_A_2(4GPJ)
BRD4_HUMAN
[Raw transfer]



08K_A_3(3U5L)
BRD4_HUMAN
[Raw transfer]



08H_A_2(3U5J)
BRD4_HUMAN
[Raw transfer]



1GH_B_11(3ZYU)
BRD4_HUMAN
[Raw transfer]



0NS_A_2(4E96)
BRD4_HUMAN
[Raw transfer]



WDR_A_2(3SVF)
BRD4_HUMAN
[Raw transfer]



73B_A_2(4BJX)
BRD4_HUMAN
[Raw transfer]



L5S_A_2(4C67)
BRD4_HUMAN
[Raw transfer]



JQ1_B_4(4FLP)
BRDT_HUMAN
[Raw transfer]



1QK_B_5(4KCX)
BRDT_HUMAN
[Raw transfer]



JQ1_A_3(4FLP)
BRDT_HUMAN
[Raw transfer]



Y1Z_A_2(4NQM)
BRD4_HUMAN
[Raw transfer]



1QK_A_3(4KCX)
BRDT_HUMAN
[Raw transfer]



13F_A_2(4HBY)
BRD4_HUMAN
[Raw transfer]



ODR_A_5(3SVG)
BRD4_HUMAN
[Raw transfer]



JQ1_A_2(3MXF)
BRD4_HUMAN
[Raw transfer]



9BM_A_5(4BW3)
BRD4_HUMAN
[Raw transfer]



GOL_A_2(4CFK)
?
[Raw transfer]



2LL_A_3(4NR8)
BRD4_HUMAN
[Raw transfer]



GOL_A_2(3JVJ)
BRD4_MOUSE
[Raw transfer]



25K_A_3(4MEN)
BRD4_HUMAN
[Raw transfer]



EAM_A_2(3P5O)
BRD4_HUMAN
[Raw transfer]



3PF_A_2(4DON)
BRD4_HUMAN
[Raw transfer]



25V_A_3(4MEO)
BRD4_HUMAN
[Raw transfer]



08J_A_5(3U5K)
BRD4_HUMAN
[Raw transfer]



GOL_A_4(4CFL)
?
[Raw transfer]



P9L_A_5(4A9L)
BRD4_HUMAN
[Raw transfer]



0S6_A_4(4F3I)
BRD4_HUMAN
[Raw transfer]



8DQ_A_2(4CFL)
?
[Raw transfer]



BAQ_A_2(4IOQ)
BRD4_HUMAN
[Raw transfer]



LY2_A_3(4CFK)
?
[Raw transfer]



15E_A_4(4HBV)
BRD4_HUMAN
[Raw transfer]



25O_A_3(4MEQ)
BRD4_HUMAN
[Raw transfer]



L46_A_2(4LZS)
?
[Raw transfer]



24Y_A_2(4MEP)
BRD4_HUMAN
[Raw transfer]



1K0_A_3(4MR3)
BRD4_HUMAN
[Raw transfer]



1K0_A_2(4J3I)
?
[Raw transfer]



CHAIN_D_2(3MUL)
BRD4_MOUSE
[Raw transfer]
-
DMS_A_6(4IOR)
BRD4_HUMAN
[Raw transfer]



R78_A_4(4OGI)
?
[Raw transfer]



BAE_A_7(4IOO)
BRD4_HUMAN
[Raw transfer]



9B6_A_2(4BW4)
BRD4_HUMAN
[Raw transfer]



2TA_A_5(4OGJ)
?
[Raw transfer]



1K0_A_5(4MR4)
BRD4_HUMAN
[Raw transfer]



EDO_A_3(2OSS)
BRD4_HUMAN
[Raw transfer]



DMS_A_4(4MEO)
BRD4_HUMAN
[Raw transfer]



EDO_A_3(4J3I)
?
[Raw transfer]



EDO_A_9(4LYI)
?
[Raw transfer]



CHAIN_C_2(4KV1)
BRD4_HUMAN
[Raw transfer]
-
EDO_A_2(2OUO)

[Raw transfer]



R78_A_4(4OGI)
?
[Raw transfer]



R78_B_6(4OGI)
?
[Raw transfer]



2TA_B_7(4OGJ)
?
[Raw transfer]



CHAIN_D_4(4KV1)
BRD4_HUMAN
[Raw transfer]
-
EDO_A_2(4J0S)
BRD4_HUMAN
[Raw transfer]



EDO_A_2(4J0R)
BRD4_HUMAN
[Raw transfer]



SIN_A_3(4NQM)
BRD4_HUMAN
[Raw transfer]



CHAIN_D_2(3MUK)
BRD4_MOUSE
[Raw transfer]
-
2TA_A_5(4OGJ)
?
[Raw transfer]



EDO_A_2(4BW3)
BRD4_HUMAN
[Raw transfer]



CHAIN_P_3(2WP2)
BRDT_MOUSE
[Raw transfer]
-
CHAIN_C_2(3JVK)
BRD4_MOUSE
[Raw transfer]
-
DMS_A_7(3MXF)
BRD4_HUMAN
[Raw transfer]



CHAIN_Q_4(2WP2)
BRDT_MOUSE
[Raw transfer]
-
4 PsiBlast_PDB 75.6190% -76 - C6 -2WP2 5.0 BRDT_MOUSE
1 PsiBlast_PDB 74.5999% -83 - C6 -4FLP 8.2 BRDT_HUMAN
22 PsiBlast_CBE 74.42100% -81 - C6 -4KCX 6.7 BRDT_HUMAN
2 PsiBlast_PDB 74.29100% -79 - C6 -4KCX 6.9 BRDT_HUMAN
55 PsiBlast_CBE 73.5573% -59 - C6 -4BW4 6.7 BRD4_HUMAN
29 PsiBlast_CBE 73.5073% -53 - C6 -4OGI 6.4 ?
25 PsiBlast_CBE 73.4473% -58 - C6 -4KV1 5.0 BRD4_HUMAN
32 PsiBlast_CBE 73.2673% -55 - C6 -4MR4 5.6 BRD4_HUMAN
27 PsiBlast_CBE 73.1873% -57 - C6 -4OGJ 7.0 ?
24 PsiBlast_CBE 73.1290% -79 - C6 -2WP2 4.9 BRDT_MOUSE
60 PsiBlast_CBE 73.1173% -58 - C6 -3ZYU 7.5 BRD4_HUMAN
43 PsiBlast_CBE 72.9973% -57 - C6 -4IOR 2.4 BRD4_HUMAN
34 PsiBlast_CBE 72.9573% -58 - C6 -4MEQ 5.6 BRD4_HUMAN
45 PsiBlast_CBE 72.8873% -59 - C6 -4IOO 2.6 BRD4_HUMAN
41 PsiBlast_CBE 72.8573% -55 - C6 -4J0S 6.6 BRD4_HUMAN
31 PsiBlast_CBE 72.8373% -60 - C6 -4NQM 9.3 BRD4_HUMAN
16 PsiBlast_PDB 72.8373% -51 - C6 -3SVG 5.4 BRD4_HUMAN
58 PsiBlast_CBE 72.8273% -58 - C6 -4BW1 6.9 BRD4_HUMAN
17 PsiBlast_PDB 72.8173% -56 - C6 -3ZYU 7.9 BRD4_HUMAN
36 PsiBlast_CBE 72.8073% -54 - C6 -4MEO 6.4 BRD4_HUMAN
38 PsiBlast_CBE 72.7973% -54 - C6 -4LZS 4.5 ?
37 PsiBlast_CBE 72.7973% -55 - C6 -4MEN 6.3 BRD4_HUMAN
26 PsiBlast_CBE 72.7973% -55 - C6 -4OGJ 2.5 ?
57 PsiBlast_CBE 72.6873% -58 - C6 -4BW2 6.8 BRD4_HUMAN
14 PsiBlast_PDB 72.6873% -54 - C6 -2YEL 8.4 BRD4_HUMAN
56 PsiBlast_CBE 72.6473% -57 - C6 -4BW3 6.8 BRD4_HUMAN
20 PsiBlast_PDB 72.6473% -55 - C6 -3U5L 7.6 BRD4_HUMAN
6 PsiBlast_PDB 72.6473% -54 - C6 -4KV1 4.9 BRD4_HUMAN
39 PsiBlast_CBE 72.6273% -52 - C6 -4LYI 2.9 ?
7 PsiBlast_PDB 72.6274% -59 - C6 -3JVJ 2.5 BRD4_MOUSE
8 PsiBlast_PDB 72.6074% -58 - C6 -3JVK 2.7 BRD4_MOUSE
21 PsiBlast_CBE 72.4999% -79 - C6 -4FLP 7.8 BRDT_HUMAN
9 PsiBlast_PDB 72.4674% -60 - C6 -3MUK 3.8 BRD4_MOUSE
12 PsiBlast_PDB 72.4473% -51 - C6 -3MXF 8.6 BRD4_HUMAN
44 PsiBlast_CBE 72.4373% -56 - C6 -4IOQ 3.1 BRD4_HUMAN
28 PsiBlast_CBE 72.4073% -53 - C6 -4OGI 2.2 ?
19 PsiBlast_PDB 72.4073% -57 - C6 -3U5K 6.9 BRD4_HUMAN
77 HHSearch 72.3974% -56 - C6 -4J3I 5.2 ?
54 PsiBlast_CBE 72.3373% -55 - C6 -4C67 6.5 BRD4_HUMAN
42 PsiBlast_CBE 72.2473% -49 - C6 -4J0R 6.6 BRD4_HUMAN
13 PsiBlast_PDB 72.2373% -52 - C6 -3P5O 8.1 BRD4_HUMAN
15 PsiBlast_PDB 72.1273% -56 - C6 -3SVF 5.7 BRD4_HUMAN
53 PsiBlast_CBE 72.0673% -53 - C6 -4CFK 6.5 ?
30 PsiBlast_CBE 71.9973% -59 - C6 -4NR8 7.0 BRD4_HUMAN
50 PsiBlast_CBE 71.9573% -49 - C6 -4F3I 8.1 BRD4_HUMAN
49 PsiBlast_CBE 71.9573% -52 - C6 -4GPJ 7.3 BRD4_HUMAN
35 PsiBlast_CBE 71.8873% -54 - C6 -4MEP 6.0 BRD4_HUMAN
18 PsiBlast_PDB 71.8373% -52 - C6 -3U5J 7.0 BRD4_HUMAN
33 PsiBlast_CBE 71.8173% -50 - C6 -4MR3 5.4 BRD4_HUMAN
75 HHSearch 71.6973% -61 * C6 *4DON 3.5 BRD4_HUMAN
10 PsiBlast_PDB 71.6174% -62 - C6 -3MUL 3.6 BRD4_MOUSE
52 PsiBlast_CBE 71.5873% -51 - C6 -4CFL 6.5 ?
47 PsiBlast_CBE 71.5873% -57 - C6 -4HBX 5.2 BRD4_HUMAN
48 PsiBlast_CBE 71.5673% -55 - C6 -4HBV 4.2 BRD4_HUMAN
51 PsiBlast_CBE 71.4973% -56 - C6 -4E96 5.8 BRD4_HUMAN
11 PsiBlast_PDB 71.4073% -54 - C6 -2OSS 2.9 BRD4_HUMAN
46 PsiBlast_CBE 71.3873% -55 - C6 -4HBY 5.7 BRD4_HUMAN
59 PsiBlast_CBE 71.2473% -58 - C6 -4A9L 5.4 BRD4_HUMAN
5 PsiBlast_PDB 70.8870% -55 - C6 -4BJX 8.5 BRD4_HUMAN
83 HHSearch 61.4341% -70 - C6 -2OUO 2.0