@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00450_PPGB_H: (2014-09-07 )
MIRAAPPPLFLLLLLLLLLVSWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY

Atome Classification :

(10 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7UZ_A_2(4CIB)
?
[Raw transfer]



GOL_A_5(4CI9)
?
[Raw transfer]



S35_A_3(4AZ3)
?
[Raw transfer]



BZS_I_9(1WHT)
?
[Raw transfer]



AIP_J_10(1BCR)
CBP2_WHEAT
[Raw transfer]
-
ARG_D_8(1BCR)
CBP2_WHEAT
[Raw transfer]



ACY_I_9(1WHS)
CBP2_WHEAT
[Raw transfer]



ACY_I_9(1WHS)
CBP2_WHEAT
[Raw transfer]



CST_K_11(1BCS)
?
[Raw transfer]
-
ARG_D_9(1BCS)
?
[Raw transfer]



DKA_A_10(1GXS)
HNLS_SORBI
[Raw transfer]



DKA_A_10(1GXS)
HNLS_SORBI
[Raw transfer]



BEZ_A_9(1GXS)
HNLS_SORBI
[Raw transfer]



BEZ_A_9(1GXS)
HNLS_SORBI
[Raw transfer]



S35_A_3(4AZ3)
?
[Raw transfer]



ACE_B_8(1WPX)
CBPY_YEAST
[Raw transfer]
3 PsiBlast_PDB 96.95100%-108 - C2 -4CIB 3.9 ?
33 HHSearch 96.73100%-110 - C2 -4CI9 2.9 ?
7 PsiBlast_PDB 63.8430% -85 - C2 -1WPX 3.3 CBPY_YEAST
6 PsiBlast_PDB 62.66100%-105 - C2 -4AZ3 3.8 ?
37 HHSearch 46.6338% -83 - C2 -1WHS 2.6 CBP2_WHEAT
36 HHSearch 46.5836% -82 - C2 -1GXS 2.9 HNLS_SORBI
12 PsiBlast_PDB 45.8438% -84 - C2 -1WHT 3.3 ?
11 PsiBlast_PDB 44.1338% -77 - C2 -1BCS 4.2 ?
10 PsiBlast_PDB 44.1338% -79 - C2 -1BCR 3.2 CBP2_WHEAT
22 PsiBlast_CBE 39.25100% -99 - C2 -4AZ3 5.7 ?