@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00536_EPHA2_: (2014-09-11 )
MELQAARACFALLWGCALAAAAAAQGKEVVLLDFAAAGGELGWLTHPYGKGWDLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAESDLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKLNVEERSVGPLTRKGFYLAFQDIGACVALLSVRVYYKKCPELLQGLAHFPETIAGSDAPSLATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRKNQRARQSPEDVYFSKSEQLKPLKTYVDPHTYEDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPSTSGSEGVPFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKDQVNTVGIPI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_D_4(1MQB)

[Raw transfer]



ADP_D_12(2HEN)

[Raw transfer]



ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]



ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]



ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]



ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]



ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]



ANP_A_3(3KEX)
ERBB3_HUMAN
[Raw transfer]



C07_A_2(4G2F)

[Raw transfer]



Q9G_A_8(2XYU)

[Raw transfer]



ANP_A_4(3FXX)

[Raw transfer]



ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]



ANP_A_3(2QO9)

[Raw transfer]



GOL_A_3(2Y6M)

[Raw transfer]



ANP_A_5(2QOC)

[Raw transfer]



STU_A_2(1U59)

[Raw transfer]



PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]



GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]



STU_A_3(3CBL)

[Raw transfer]



IFC_A_2(3DZQ)

[Raw transfer]



1N1_A_2(2Y6O)

[Raw transfer]



03P_A_5(3POZ)

[Raw transfer]



CHAIN_B_2(3FXX)

[Raw transfer]
-
CHAIN_B_2(3FY2)

[Raw transfer]
-
CHAIN_B_2(3CBL)

[Raw transfer]
-
22 PsiBlast_CBE 70.39100%-115 - C2 -1MQB 4.0
5 PsiBlast_PDB 69.69100%-115 - C2 -1MQB 4.2 EPHA2_HUMAN
8 PsiBlast_PDB 68.8065%-109 - C2 -3FXX 7.7
9 PsiBlast_PDB 68.2865%-113 - C2 -3FY2 7.0
16 PsiBlast_PDB 67.7964%-110 - C2 -2QOC 4.8
7 PsiBlast_PDB 67.1865%-110 - C2 -2QO9 4.4
26 PsiBlast_CBE 66.9974%-118 - C2 -2XYU 7.0
18 PsiBlast_PDB 66.6464%-111 - C2 -4G2F 5.7
23 PsiBlast_CBE 66.0874%-117 - C2 -2Y6O 7.4
24 PsiBlast_CBE 65.8974%-115 - C2 -2Y6M 2.7
17 PsiBlast_PDB 65.6964%-115 - C2 -3DZQ 10.8
29 PsiBlast_CBE 65.4071%-110 - C2 -2HEN 5.4 EPHB2_MOUSE
28 PsiBlast_CBE 65.0971%-108 - C2 -2HEN 5.0 EPHB2_MOUSE
30 PsiBlast_CBE 64.8971%-110 - C2 -2HEN 4.8 EPHB2_MOUSE
27 PsiBlast_CBE 64.8671%-109 - C2 -2HEN 5.6
49 HHSearch 62.7563%-109 - C2 -3KUL 3.0 EPHA8_HUMAN
61 HHSearch 61.1936%-104 - C2 -4FL3 6.4 KSYK_HUMAN
52 HHSearch 58.5241%-100 - C2 -3CBL 8.8
59 HHSearch 58.2539%-106 - C2 -2OZO 5.7 ZAP70_HUMAN
57 HHSearch 56.8244%-104 - C2 -1QCF 6.6 HCK_HUMAN
62 HHSearch 56.7739%-102 - C2 -1U59 5.8
53 HHSearch 55.8738%-105 - C2 -3POZ 10.6
58 HHSearch 53.5832% -97 - C2 -3KEX 5.1 ERBB3_HUMAN