@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00536_EPHA6_: (2014-09-11 )
MGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDESHGIKFKPNQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTGPPSAPRNVVFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINNSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDHDAPSLIGMMRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYVFHIRVRTATGYSGYSQKFEFETGDEASDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGHCKFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKSSFPAIGVEAFCPSFLRAGFLNSIQAPHPVPGGGSLPPRIPAGRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVPEYPLFVTVGDWLDSIKMGQYKNNFVAAGFTTFDLISRMSIEDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C07_A_2(4G2F)

[Raw transfer]



ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]



IHZ_A_2(3DKO)

[Raw transfer]



ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]



ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]



ANP_A_4(3FXX)

[Raw transfer]



Q9G_A_8(2XYU)

[Raw transfer]



GOL_A_3(2Y6M)

[Raw transfer]



ANP_A_5(2QOC)

[Raw transfer]



ANP_A_3(3KEX)
ERBB3_HUMAN
[Raw transfer]



GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]



1N1_A_2(2Y6O)

[Raw transfer]



STU_A_2(1U59)

[Raw transfer]



ANP_A_3(2QO9)

[Raw transfer]



PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]



STU_A_3(3CBL)

[Raw transfer]



IFC_A_2(3DZQ)

[Raw transfer]



03P_A_5(3POZ)

[Raw transfer]



CHAIN_B_2(3CBL)

[Raw transfer]
-
16 PsiBlast_PDB 74.3972%-106 - C2 -3DKO 8.3
9 PsiBlast_PDB 73.8563%-109 - C2 -3FXX 4.3
17 PsiBlast_PDB 73.1064%-107 - C2 -2QOC 5.1
8 PsiBlast_PDB 72.7763%-109 - C2 -2QO9 4.2
19 PsiBlast_PDB 72.3264%-111 - C2 -4G2F 5.7
18 PsiBlast_PDB 71.9964%-112 - C2 -3DZQ 10.3
22 PsiBlast_CBE 71.9573%-113 - C2 -2Y6O 7.1
23 PsiBlast_CBE 71.7373%-112 - C2 -2Y6M 2.6
24 PsiBlast_CBE 71.4673%-116 - C2 -2XYU 6.4
44 HHSearch 68.9472%-104 - C2 -3KUL 2.9 EPHA8_HUMAN
45 HHSearch 68.8870%-105 - C2 -1MQB 4.1 EPHA2_HUMAN
55 HHSearch 63.1737% -98 - C2 -4FL3 6.1 KSYK_HUMAN
46 HHSearch 61.6242% -94 * C2 *3CBL 8.7
54 HHSearch 60.4540% -97 - C2 -2OZO 5.4 ZAP70_HUMAN
51 HHSearch 58.5743% -98 - C2 -1QCF 6.4 HCK_HUMAN
53 HHSearch 57.5740% -96 - C2 -1U59 5.8
47 HHSearch 56.2235% -98 - C2 -3POZ 10.4
56 HHSearch 55.5933% -89 - C2 -3KEX 5.0 ERBB3_HUMAN