@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00557_MAP1_E: (2014-09-11 )
MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U17_A_5(2GGB)
MAP1_ECOLI
[Raw transfer]



NLP_B_10(2GU5)
MAP1_ECOLI
[Raw transfer]



NLP_A_9(2GU5)
MAP1_ECOLI
[Raw transfer]



NLP_A_5(1C27)
MAP1_ECOLI
[Raw transfer]



NLP_A_9(2GU6)
MAP1_ECOLI
[Raw transfer]



NLP_B_10(2GU6)
MAP1_ECOLI
[Raw transfer]



MPH_A_5(1C23)
MAP1_ECOLI
[Raw transfer]



YE7_A_4(2P98)
MAP1_ECOLI
[Raw transfer]



U15_A_5(2GG8)
MAP1_ECOLI
[Raw transfer]



NLP_A_9(2GU4)
MAP1_ECOLI
[Raw transfer]



NLP_B_8(2GTX)
MAP1_ECOLI
[Raw transfer]



NLP_B_10(2GU4)
MAP1_ECOLI
[Raw transfer]



NLP_A_7(2GTX)
MAP1_ECOLI
[Raw transfer]



U16_A_5(2GG9)
MAP1_ECOLI
[Raw transfer]



5C1_A_3(4A6W)
?
[Raw transfer]



MPJ_A_5(1C24)
MAP1_ECOLI
[Raw transfer]



W29_A_4(3D27)
MAP1_ECOLI
[Raw transfer]



Y02_A_4(3PKA)
MAP12_MYCTU
[Raw transfer]



IKY_A_5(4A6V)
?
[Raw transfer]



B21_A_5(2Q93)
MAP1_ECOLI
[Raw transfer]



U14_A_5(2GG7)
MAP1_ECOLI
[Raw transfer]



CHAIN_I_2(3MAT)
MAP1_ECOLI
[Raw transfer]
-
U11_A_5(2GG0)
MAP1_ECOLI
[Raw transfer]



IKY_B_7(4A6V)
?
[Raw transfer]



A18_A_5(2Q96)
MAP1_ECOLI
[Raw transfer]



U13_A_5(2GG3)
MAP1_ECOLI
[Raw transfer]



U12_A_5(2GG2)
MAP1_ECOLI
[Raw transfer]



FCD_A_5(1XNZ)
MAP1_ECOLI
[Raw transfer]



FC2_A_5(2EVM)
MAP1_ECOLI
[Raw transfer]



YE6_A_4(2P99)
MAP1_ECOLI
[Raw transfer]



A05_A_5(2Q95)
MAP1_ECOLI
[Raw transfer]



FC3_A_5(2EVC)
MAP1_ECOLI
[Raw transfer]



A04_A_5(2Q94)
MAP1_ECOLI
[Raw transfer]



MF3_A_5(1C22)
MAP1_ECOLI
[Raw transfer]



B23_A_5(2Q92)
MAP1_ECOLI
[Raw transfer]



U19_A_5(2GG5)
MAP1_ECOLI
[Raw transfer]



TMG_A_7(1YVM)
MAP1_ECOLI
[Raw transfer]



QMS_A_6(2BB7)
MAP1_ECOLI
[Raw transfer]



CT0_A_10(2EVO)
MAP1_ECOLI
[Raw transfer]



CT0_B_9(2EVO)
MAP1_ECOLI
[Raw transfer]



YE6_A_5(2P9A)
MAP1_ECOLI
[Raw transfer]



CIT_A_4(3TB5)
?
[Raw transfer]



FZ1_A_6(4IU6)
MAP11_HUMAN
[Raw transfer]



LMR_A_8(3TAV)
?
[Raw transfer]
23 PsiBlast_CBE 96.46100%-107 - C1 -2Q96 4.7 MAP1_ECOLI
40 PsiBlast_CBE 96.1599%-108 - C1 -2GU5 3.9 MAP1_ECOLI
32 PsiBlast_CBE 96.03100%-110 - C1 -2Q94 4.8 MAP1_ECOLI
42 PsiBlast_CBE 95.9499%-109 - C1 -2GU4 3.1 MAP1_ECOLI
12 PsiBlast_PDB 95.84100%-108 - C1 -2GG0 5.3 MAP1_ECOLI
13 PsiBlast_PDB 95.81100%-107 - C1 -2GG2 5.0 MAP1_ECOLI
38 PsiBlast_CBE 95.7999%-109 - C1 -2GU6 4.0 MAP1_ECOLI
30 PsiBlast_CBE 95.6899%-108 - C1 -1C22 3.1 MAP1_ECOLI
29 PsiBlast_CBE 95.6799%-111 - C1 -1C23 3.6 MAP1_ECOLI
16 PsiBlast_PDB 95.63100%-106 - C1 -2GG7 4.5 MAP1_ECOLI
34 PsiBlast_CBE 95.61100%-110 - C1 -2P9A 4.0 MAP1_ECOLI
19 PsiBlast_PDB 95.57100%-108 - C1 -2GGB 4.0 MAP1_ECOLI
35 PsiBlast_CBE 95.30100%-112 - C1 -2P98 5.4 MAP1_ECOLI
45 PsiBlast_CBE 95.25100%-110 - C1 -2GTX 3.9 MAP1_ECOLI
17 PsiBlast_PDB 95.21100%-108 - C1 -2GG8 5.2 MAP1_ECOLI
7 PsiBlast_PDB 95.16100%-110 - C1 -4A6V 5.0 ?
25 PsiBlast_CBE 95.11100%-107 - C1 -2Q93 4.5 MAP1_ECOLI
28 PsiBlast_CBE 95.0499%-109 - C1 -1C24 3.4 MAP1_ECOLI
33 PsiBlast_CBE 95.00100%-110 - C1 -2Q92 3.7 MAP1_ECOLI
24 PsiBlast_CBE 95.00100%-110 - C1 -2Q95 5.0 MAP1_ECOLI
46 PsiBlast_CBE 94.94100%-107 - C1 -2GTX 3.1 MAP1_ECOLI
41 PsiBlast_CBE 94.8699%-108 - C1 -2GU5 3.9 MAP1_ECOLI
11 PsiBlast_PDB 94.8399%-108 - C1 -4A6W 4.4 ?
14 PsiBlast_PDB 94.82100%-107 - C1 -2GG3 4.4 MAP1_ECOLI
43 PsiBlast_CBE 94.7799%-108 - C1 -2GU4 4.0 MAP1_ECOLI
18 PsiBlast_PDB 94.68100%-106 - C1 -2GG9 6.3 MAP1_ECOLI
44 PsiBlast_CBE 94.58100%-109 - C1 -3D27 4.4 MAP1_ECOLI
22 PsiBlast_CBE 94.53100%-106 - C1 -4A6V 5.1 ?
47 PsiBlast_CBE 94.52100%-112 - C1 -2P99 5.4 MAP1_ECOLI
2 PsiBlast_PDB 94.40100%-113 - C1 -2BB7 4.1 MAP1_ECOLI
27 PsiBlast_CBE 94.3699%-109 - C1 -1C27 3.6 MAP1_ECOLI
4 PsiBlast_PDB 94.34100%-108 - C1 -2EVM 5.1 MAP1_ECOLI
39 PsiBlast_CBE 94.3199%-106 - C1 -2GU6 3.1 MAP1_ECOLI
10 PsiBlast_PDB 94.1199%-108 - C1 -1YVM 4.0 MAP1_ECOLI
15 PsiBlast_PDB 93.90100%-108 - C1 -2GG5 4.7 MAP1_ECOLI
21 PsiBlast_CBE 93.87100%-107 - C1 -2EVO 3.3 MAP1_ECOLI
1 PsiBlast_PDB 93.83100%-109 - C1 -1XNZ 4.7 MAP1_ECOLI
8 PsiBlast_PDB 93.4499%-108 - C1 -3MAT 4.8 MAP1_ECOLI
3 PsiBlast_PDB 93.27100%-106 - C1 -2EVC 5.5 MAP1_ECOLI
5 PsiBlast_PDB 92.98100%-108 - C1 -2EVO 3.3 MAP1_ECOLI
69 HHSearch 66.6851% -96 - C1 -3PKA 7.3 MAP12_MYCTU
58 HHSearch 65.5648% -99 - C1 -2B3H - MAP11_HUMAN
60 HHSearch 65.4048% -97 * C1 *4IU6 5.1 MAP11_HUMAN
70 HHSearch 63.0540% -95 - C1 -3TB5 3.3 ?
73 HHSearch 59.6638% -92 - C1 -3TAV 2.3 ?