@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00569_EP300_HUMAN: (2014-09-11 )
MAENVVEPGPPSAKRPKLSSPALSASASDGTDFGSLFDLEHDLPDELINSTELGLTNGGDINQLQTSLGMVQDAASKHKQLSELLRSGSSPNLNMGVGGPGQVMASQAQQSSPGLGLINSMVKSPMTQAGLTSPNMGMGTSGPNQGPTQSTGMMNSPVNQPAMGMNTGMNAGMNPGMLAAGNGQGIMPNQVMNGSIGAGRGRQNMQYPNPGMGSAGNLLTEPLQQGSPQMGGQTGLRGPQPLKMGMMNNPNPYGSPYTQNPGQQIGASGLGLQIQTKTVLSNNLSPFAMDKKAVPGGGMPNMGQQPAPQVQQPGLVTPVAQGMGSGAHTADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNCTRHDCPVCLPLKNAGDKRNQQPILTGAPVGLGNPSSLGVGQQSAPNLSTVSQIDPSSIERAYAALGLPYQVNQMPTQPQVQAKNQQNQQPGQSPQGMRPMSNMSASPMGVNGGVGVQTPSLLSDSMLHSAINSQNPMMSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTSNGPLPDPSMIRGSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPLQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPADTQPEDISESKVEDCKMESTETEERSTELKTEIKEEEDQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQSLGYCCGRKLEFSPQTLCCYGKQLCTIPRDATYYSYQNRYHFCEKCFNEIQGESVSLGDDPSQPQTTINKEQFSKRKNDTLDPELFVECTECGRKMHQICVLHHEIIWPAGFVCDGCLKKSARTRKENKFSAKRLPSTRLGTFLENRVNDFLRRQNHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAESFPYRTKALFAFEEIDGVDLCFFGMHVQEYGSDCPPPNQRRVYISYLDSVHFFRPKCLRTAVYHEILIGYLEYVKKLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHDYKDIFKQATEDRLTSAKELPYFEGDFWPNVLEESIKELEQEEEERKREENTSNESTDVTKGDSKNAKKKNNKKTSKNKSSLSRGNKKKPGMPNVSNDLSQKLYATMEKHKEVFFVIRLIAGPAANSLPPIVDPDPLIPCDLMDGRDAFLTLARDKHLEFSSLRRAQWSTMCMLVELHTQSQDRFVYTCNECKHHVETRWHCTVCEDYDLCITCYNTKNHDHKMEKLGLGLDDESNNQQAAATQSPGDSRRLSIQRCIQSLVHACQCRNANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMASMQRTGVVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAPMGMNPPPMTRGPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQLQSGMPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQALQNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIPGQPGMPQGQPGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLPQALGAEAGASLQAYQQRLLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQGHFASPDQNSMLSQLASNPGMANLHGASATDLGLSTDNSDLNSNLSQSTLDIH

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3PF_B_14(3P1F)

[Raw transfer]




15E_C_7(4NYV)
?
[Raw transfer]




15E_D_8(4NYV)
?
[Raw transfer]




3PF_A_7(3P1F)
CBP_HUMAN
[Raw transfer]




15E_B_6(4NYV)
?
[Raw transfer]




MB3_A_4(3P1D)
CBP_HUMAN
[Raw transfer]




DMS_A_4(3P1E)
CBP_HUMAN
[Raw transfer]




2O4_A_2(4NYX)
?
[Raw transfer]




2O3_A_3(4NYW)
?
[Raw transfer]




2LK_A_3(4NR4)
CBP_HUMAN
[Raw transfer]




2LL_A_2(4NR5)

[Raw transfer]




MB3_B_6(3P1D)

[Raw transfer]




KRG_A_4(3SVH)
CBP_HUMAN
[Raw transfer]




CHAIN_C_2(4N3W)
?
[Raw transfer]

-

ALY_A_3(3P1C)
CBP_HUMAN
[Raw transfer]




15E_A_5(4NYV)
?
[Raw transfer]




ALY_B_5(3P1C)

[Raw transfer]




KRG_B_7(3SVH)

[Raw transfer]




DMS_B_5(3P1E)

[Raw transfer]




2LO_A_5(4NR7)

[Raw transfer]




2LN_A_2(4NR6)

[Raw transfer]




TYL_A_5(4A9K)
CBP_HUMAN
[Raw transfer]




TYL_B_8(4A9K)

[Raw transfer]




CHAIN_A_1(1JSP)

[Raw transfer]

-

EDO_A_4(4NR4)
CBP_HUMAN
[Raw transfer]




L85_A_2(2L85)

[Raw transfer]




EDO_A_5(3P1F)

[Raw transfer]




TTR_B_2(2D82)

[Raw transfer]




2LK_A_3(4NR4)

[Raw transfer]




2LK_B_5(4NR4)
CBP_HUMAN
[Raw transfer]




CHAIN_P_2(1E6I)

[Raw transfer]

-

3 PsiBlast_PDB 45.9390% -31 - C1 -4N3W 5.9 ?
6 PsiBlast_PDB 33.7395% 2 - C1 -3P1C 3.0 CBP_HUMAN
14 PsiBlast_PDB 33.4695% 6 - C1 -4NR6 6.5
16 PsiBlast_PDB 33.4595% 4 - C1 -4NYV 4.3 ?
30 PsiBlast_CBE 33.2795% 6 - C1 -3SVH 4.8
7 PsiBlast_PDB 33.2795% 6 - C1 -3P1D 2.7 CBP_HUMAN
11 PsiBlast_PDB 33.2695% 7 - C1 -4A9K 3.3 CBP_HUMAN
18 PsiBlast_PDB 33.2395% -0 - C1 -4NYX 7.3 ?
9 PsiBlast_PDB 33.2295% 4 - C1 -3P1F 4.2 CBP_HUMAN
27 PsiBlast_CBE 33.1895% 4 - C1 -4NYV 4.5 ?
31 PsiBlast_CBE 33.1295% 6 - C1 -3P1F 4.0
17 PsiBlast_PDB 33.1195% 6 - C1 -4NYW 7.4 ?
10 PsiBlast_PDB 33.0695% 4 - C1 -3SVH 4.9 CBP_HUMAN
33 PsiBlast_CBE 33.0095% 2 - C1 -3P1D 2.8
20 PsiBlast_PDB 32.8395% 2 - C1 -2D82 5.0
13 PsiBlast_PDB 32.8395% 9 - C1 -4NR5 6.9
15 PsiBlast_PDB 32.8195% 9 - C1 -4NR7 7.9
26 PsiBlast_CBE 32.8095% 5 - C1 -4NYV 4.7 ?
8 PsiBlast_PDB 32.7095% 4 - C1 -3P1E 3.6 CBP_HUMAN
35 PsiBlast_CBE 32.6795% -3 - C1 -2L85 3.9
32 PsiBlast_CBE 32.6795% 3 - C1 -3P1E 3.6
25 PsiBlast_CBE 32.6395% 3 - C1 -4NYV 4.6 ?
29 PsiBlast_CBE 32.6295% 1 - C1 -4A9K 3.4
28 PsiBlast_CBE 32.5495% 9 - C1 -4NR4 2.8
34 PsiBlast_CBE 32.4295% 7 - C1 -3P1C 2.6
12 PsiBlast_PDB 32.2795% 13 - C1 -4NR4 8.1 CBP_HUMAN
19 PsiBlast_PDB 28.2895% 22 - C1 -1JSP Error
53 Fugue 24.9630% 35 * C1 *1E6I 4.4