@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00613_PK3CA_: (2014-09-12 )
MPPRPSSGELWGIHLMPPRILVECLLPNGMIVTLECLREATLITIKHELFKEARKYPLHQLLQDESSYIFVSVTQEAEREEFFDETRRLCDLRLFQPFLKVIEPVGNREEKILNREIGFAIGMPVCEFDMVKDPEVQDFRRNILNVCKEAVDLRDLNSPHSRAMYVYPPNVESSPELPKHIYNKLDKGQIIVVIWVIVSPNNDKQKYTLKINHDCVPEQVIAEAIRKKTRSMLLSSEQLKLCVLEYQGKYILKVCGCDEYFLEKYPLSQYKYIRSCIMLGRMPNLMLMAKESLYSQLPMDCFTMPSYSRRISTATPYMNGETSTKSLWVINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLELEFDWFSSVVKFPDMSVIEEHANWSVSREAGFSYSHAGLSNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRFGLLLESYCRACGMYLKHLNRQVEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYFMKQMNDAHHGGWTTKMDWIFHTIKQHALN

Atome Classification :

(6 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(1E8X)
PK3CG_PIG
[Raw transfer]



0TB_A_2(4FAD)
PK3CG_HUMAN
[Raw transfer]



QK0_A_5(3QK0)
PK3CG_HUMAN
[Raw transfer]



093_A_3(2X6J)
?
[Raw transfer]



ML8_A_2(3ML8)
PK3CG_HUMAN
[Raw transfer]



090_A_3(2X6I)
?
[Raw transfer]



X6K_A_5(2X6K)
?
[Raw transfer]



FJY_A_5(4FJY)
PK3CG_HUMAN
[Raw transfer]



GD9_A_3(2Y3A)
PK3CB_MOUSE
[Raw transfer]



GD9_A_3(2Y3A)
PK3CB_MOUSE
[Raw transfer]
33 HHSearch 78.2441%-107 - C2 -2Y3A Error PK3CB_MOUSE
22 Fugue 72.2436% -99 - C2 -1E8X 4.9 PK3CG_PIG
6 PsiBlast_PDB 72.2235%-107 - C2 -4FAD 7.4 PK3CG_HUMAN
5 PsiBlast_PDB 71.8335%-106 - C2 -4FJY 8.4 PK3CG_HUMAN
4 PsiBlast_PDB 71.6235%-107 - C2 -3QK0 8.0 PK3CG_HUMAN
7 PsiBlast_PDB 70.9135%-106 - C2 -3ML8 7.8 PK3CG_HUMAN