@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00615_ARBK1_: (2014-09-12 )
MADLEAVLADVSYLMAMEKSKATPAARASKKILLPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFDSYIMKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAKNKQLGHEEDYALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQQLVQRVPKMKNKPRSPVVELSKVPLVQRGSANGL

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BA1_A_4(3KRW)
ARBK1_HUMAN
[Raw transfer]



BA1_A_4(3KRX)
ARBK1_HUMAN
[Raw transfer]



ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]



ATP_A_7(3C4X)
RK_BOVIN
[Raw transfer]



QRX_A_4(3PVW)
ARBK1_BOVIN
[Raw transfer]



ATP_A_9(3C4W)
RK_BOVIN
[Raw transfer]



ADP_A_12(3C51)
RK_BOVIN
[Raw transfer]



QRW_A_4(3PVU)
ARBK1_BOVIN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]



29X_A_5(4MK0)
?
[Raw transfer]



CHAIN_B_2(3UZT)
ARBK1_BOVIN
[Raw transfer]
-
STU_B_2(1XJD)

[Raw transfer]



07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]



SGV_A_3(3NYN)
GRK6_HUMAN
[Raw transfer]



ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]



AMP_A_3(3NYO)
GRK6_HUMAN
[Raw transfer]



SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]
1 PsiBlast_PDB 98.81100%-108 - C1 -3KRW 7.3 ARBK1_HUMAN
2 PsiBlast_PDB 98.58100%-106 - C1 -3KRX 7.7 ARBK1_HUMAN
11 PsiBlast_PDB 98.53100%-107 - C1 -4MK0 6.8 ?
9 PsiBlast_PDB 97.6098%-111 - C1 -3PVU 8.5 ARBK1_BOVIN
10 PsiBlast_PDB 97.2298%-109 - C1 -3PVW 8.9 ARBK1_BOVIN
7 PsiBlast_PDB 90.4098%-109 - C1 -3UZT 5.7 ARBK1_BOVIN
21 Fugue 60.7338% -90 - C1 -2ACX 4.7 GRK6_HUMAN
17 PsiBlast_PDB 59.6134% -97 - C1 -3C4Z 5.4 RK_BOVIN
19 PsiBlast_PDB 59.4834% -97 - C1 -3C4W 4.9 RK_BOVIN
15 PsiBlast_PDB 58.8334% -94 - C1 -3C4X 5.2 RK_BOVIN
18 PsiBlast_PDB 57.9434% -94 - C1 -3C51 4.0 RK_BOVIN
40 HHSearch 40.4832% -98 - C1 -4DC2 4.1 KPCI_MOUSE
43 HHSearch 37.9736%-104 - C1 -1XJD 5.6
39 HHSearch 37.4133%-102 - C1 -3TXO 6.6 KPCL_HUMAN
44 HHSearch 34.9439%-101 - C1 -2R5T 6.8 SGK1_HUMAN
52 HHSearch 33.1340% -99 - C1 -3UBD 7.0 KS6A3_MOUSE
12 PsiBlast_PDB 24.2938% 9 - C1 -3NYN 3.9 GRK6_HUMAN
13 PsiBlast_PDB 23.5938% 9 - C1 -3NYO 3.0 GRK6_HUMAN