@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00627_MARK4_: (2014-09-13 )
MSSRTVLAPGNDRNSDTHGTLGSGRSSDKGPSWSSRSLGARCRNSIASCPEEQPHVGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGYEGEELKPYTEPEEDFGDTKRIEVMVGMGYTREEIKESLTSQKYNEVTATYLLLGRKTEEGGDRGAPGLALARVRAPSDTTNGTSSSKGTSHSKGQRSSSSTYHRQRRHSDFCGPSPAPLHPKRSPTSTGEAELKEERLPGRKASCSTAGSGSRGLPPSSPMVSSAHNPNKAEIPERRKDSTSTPNNLPPSMMTRRNTYVCTERPGAERPSLLPNGKENSSGTPRVPPASPSSHSLAPPSGERSRLARGSTIRSTFHGGQVRDRRAGGGGGGGVQNGPPASPTLAHEAAPLPAGRPRPTTNLFTKLTSKLTRRVADEPERIGGPEVTSCHLPWDQTETAPRLLRFPWSVKLTSSRPPEALMAALRQATAAARCRCRQPQPFLLACLHGGAGGPEPLSHFEVEVCQLPRPGLRGVLFRRVAGTALAFRTLVTRISNDLEL

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]




ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




STU_A_5(4CFH)
AAPK1_RAT
[Raw transfer]




1WS_A_2(4BKZ)
MELK_HUMAN
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




CHAIN_H_8(3IEC)
MARK2_HUMAN
[Raw transfer]

-

82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




CHAIN_F_6(3IEC)
MARK2_HUMAN
[Raw transfer]

-

CHAIN_G_7(3IEC)
MARK2_HUMAN
[Raw transfer]

-

23 PsiBlast_CBE 91.3785%-113 - C1 -3IEC 9.9 MARK2_HUMAN
22 PsiBlast_CBE 91.2385%-115 - C1 -3IEC 9.9 MARK2_HUMAN
21 PsiBlast_CBE 91.2085%-113 - C1 -3IEC 9.8 MARK2_HUMAN
35 HHSearch 68.3642% -94 - C1 -4BKY 7.9 MELK_HUMAN
38 HHSearch 63.3736%-110 - C1 -4GV1 6.7 AKT1_HUMAN
20 PsiBlast_PDB 63.1545%-107 - C1 -4BKZ 5.7 MELK_HUMAN
17 PsiBlast_PDB 62.9044%-105 - C1 -4CFH 8.3 AAPK1_RAT
18 PsiBlast_PDB 62.4845%-105 - C1 -4BL1 6.4 MELK_HUMAN
50 HHSearch 61.5934%-101 - C1 -1RDQ 6.7 KAPCA_MOUSE
16 PsiBlast_PDB 61.4945%-104 - C1 -3AQV 7.3 AAPK2_HUMAN
48 HHSearch 60.5836%-104 - C1 -2Y0A 2.8 DAPK1_HUMAN
52 HHSearch 59.7937% -97 - C1 -3SOA 3.4 KCC2A_HUMAN
53 HHSearch 57.3735%-107 - C1 -3TKI 5.6 CHK1_HUMAN
42 HHSearch 57.1735% -98 - C1 -2YEX 3.1 CHK1_HUMAN