@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00641_MDM2_H: (2014-09-13 )
MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGTSVSENRCHLEGGSDQKDLVQELQEEKPSSSHLVSRPSTSSRRRAISETEENSDELSGERQRKRHKSDSISLSFDESLALCVIREICCERSSSSESTGTPSNPDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2SW_C_5(4OAS)
?
[Raw transfer]



0Y7_D_12(4HBM)
MDM2_HUMAN
[Raw transfer]



2SW_A_4(4OAS)
?
[Raw transfer]



2SW_E_6(4OAS)
?
[Raw transfer]



0R3_A_4(4ERF)
MDM2_HUMAN
[Raw transfer]



0Y7_F_14(4HBM)
MDM2_HUMAN
[Raw transfer]



1MT_C_5(4JVR)
MDM2_HUMAN
[Raw transfer]



0Y7_E_13(4HBM)
MDM2_HUMAN
[Raw transfer]



0Y7_C_11(4HBM)
MDM2_HUMAN
[Raw transfer]



0Y7_H_16(4HBM)
MDM2_HUMAN
[Raw transfer]



0Y7_A_9(4HBM)
MDM2_HUMAN
[Raw transfer]



1MT_A_4(4JVR)
MDM2_HUMAN
[Raw transfer]



0R3_C_5(4ERF)
MDM2_HUMAN
[Raw transfer]



BLF_B_4(4DIJ)
MDM2_HUMAN
[Raw transfer]



0R3_E_6(4ERF)
MDM2_HUMAN
[Raw transfer]



MI6_C_5(3LBL)
MDM2_HUMAN
[Raw transfer]



0Y7_G_15(4HBM)
MDM2_HUMAN
[Raw transfer]



MI6_E_6(3LBL)
MDM2_HUMAN
[Raw transfer]



TJ2_C_6(3TJ2)
MDM2_HUMAN
[Raw transfer]



BLF_A_3(4DIJ)
MDM2_HUMAN
[Raw transfer]



MI6_A_4(3LBL)
MDM2_HUMAN
[Raw transfer]



1MY_A_4(4JWR)
MDM2_HUMAN
[Raw transfer]



0R2_A_3(4ERE)
MDM2_HUMAN
[Raw transfer]



0R2_B_5(4ERE)
MDM2_HUMAN
[Raw transfer]



1MY_C_6(4JWR)
MDM2_HUMAN
[Raw transfer]



TJ2_A_3(3TJ2)
MDM2_HUMAN
[Raw transfer]



K23_A_2(3LBK)
MDM2_HUMAN
[Raw transfer]



1MY_B_5(4JWR)
MDM2_HUMAN
[Raw transfer]



28W_A_2(4MDQ)
MDM2_HUMAN
[Raw transfer]



07G_A_2(3TU1)
MDM2_HUMAN
[Raw transfer]



Y30_A_2(4MDN)
MDM2_HUMAN
[Raw transfer]



DIZ_A_3(1T4E)
MDM2_HUMAN
[Raw transfer]



DIZ_B_4(1T4E)
MDM2_HUMAN
[Raw transfer]



I18_A_2(4J74)
MDM2_XENLA
[Raw transfer]



CHAIN_B_2(3G03)
MDM2_HUMAN
[Raw transfer]
-
YIN_A_2(3JZK)
MDM2_HUMAN
[Raw transfer]



1MQ_A_2(4JVE)
MDM2_HUMAN
[Raw transfer]



1MO_A_2(4JV9)
MDM2_HUMAN
[Raw transfer]



CHAIN_B_2(2AXI)
MDM2_HUMAN
[Raw transfer]
-
1MN_A_2(4JV7)
MDM2_HUMAN
[Raw transfer]



CHAIN_L_2(3FEA)
MDM4_HUMAN
[Raw transfer]
-
BLF_B_4(4DIJ)
MDM2_HUMAN
[Raw transfer]



CHAIN_C_3(3V3B)
MDM2_HUMAN
[Raw transfer]
-
BLF_A_3(4DIJ)
MDM2_HUMAN
[Raw transfer]



CHAIN_B_2(4HFZ)
MDM2_HUMAN
[Raw transfer]
-
EDO_P_3(3JZS)
MDM2_HUMAN
[Raw transfer]



CHAIN_J_10(3LNZ)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_P_16(3LNZ)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_D_4(3V3B)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_B_2(1YCR)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_L_12(3LNZ)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_N_14(3LNZ)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_B_2(3TPX)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_B_2(3TPX)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_F_6(3TPX)
MDM2_HUMAN
[Raw transfer]
-
MPO_A_5(2AXI)
MDM2_HUMAN
[Raw transfer]



CHAIN_P_2(3JZS)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_P_2(3JZR)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_P_2(1T4F)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_D_4(4HFZ)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_B_2(2GV2)
MDM2_HUMAN
[Raw transfer]
-
CHAIN_D_4(3G03)
MDM2_HUMAN
[Raw transfer]
-
0Y7_A_9(4HBM)
MDM2_HUMAN
[Raw transfer]



CHAIN_B_3(1YCQ)
MDM2_XENLA
[Raw transfer]
-
CHAIN_B_2(4N5T)
MDM4_DANRE
[Raw transfer]
-
CHAIN_B_4(3DAC)
MDM4_DANRE
[Raw transfer]
-
CHAIN_P_2(2Z5S)
MDM4_DANRE
[Raw transfer]
-
1 PsiBlast_PDB 91.76100%-119 - C4 -4HBM 8.7 MDM2_HUMAN
25 PsiBlast_CBE 91.62100%-130 - C4 -4HBM 8.3 MDM2_HUMAN
23 PsiBlast_CBE 90.81100%-122 - C4 -4HBM 8.6 MDM2_HUMAN
24 PsiBlast_CBE 90.48100%-125 - C4 -4HBM 8.6 MDM2_HUMAN
22 PsiBlast_CBE 90.21100%-127 - C4 -4HBM 8.4 MDM2_HUMAN
26 PsiBlast_CBE 89.79100%-116 - C4 -4HBM 8.7 MDM2_HUMAN
27 PsiBlast_CBE 89.32100%-121 - C4 -4HBM 2.9 MDM2_HUMAN
21 PsiBlast_CBE 88.67100%-127 - C4 -4HBM 8.4 MDM2_HUMAN
8 PsiBlast_PDB 87.47100%-126 - C4 -3JZR 8.7 MDM2_HUMAN
37 PsiBlast_CBE 87.42100%-135 - C4 -1T4E 8.0 MDM2_HUMAN
13 PsiBlast_PDB 87.11100%-138 - C4 -1T4E 7.9 MDM2_HUMAN
41 PsiBlast_CBE 86.99100%-132 - C4 -3TJ2 7.2 MDM2_HUMAN
14 PsiBlast_PDB 86.65100%-138 - C4 -3JZK 8.7 MDM2_HUMAN
10 PsiBlast_PDB 86.02100%-136 - C4 -3TU1 7.3 MDM2_HUMAN
17 PsiBlast_PDB 85.37100%-132 - C4 -4OAS 8.4 ?
48 PsiBlast_CBE 84.99100%-135 - C4 -4MDN 10.0 MDM2_HUMAN
35 PsiBlast_CBE 84.53100%-139 - C4 -4ERF 7.7 MDM2_HUMAN
42 PsiBlast_CBE 84.51100%-129 - C4 -3TJ2 7.2 MDM2_HUMAN
40 PsiBlast_CBE 84.51100%-148 - C4 -4JVR 8.2 MDM2_HUMAN
46 PsiBlast_CBE 84.3298%-134 - C4 -4DIJ 8.4 MDM2_HUMAN
32 PsiBlast_CBE 84.18100%-137 - C4 -4OAS 8.5 ?
36 PsiBlast_CBE 84.05100%-137 - C4 -4ERE 6.4 MDM2_HUMAN
47 PsiBlast_CBE 84.0198%-134 - C4 -4DIJ 8.3 MDM2_HUMAN
33 PsiBlast_CBE 83.95100%-137 - C4 -4OAS 8.6 ?
44 PsiBlast_CBE 83.74100%-133 - C4 -3LBL 8.4 MDM2_HUMAN
34 PsiBlast_CBE 83.39100%-137 - C4 -4ERF 7.8 MDM2_HUMAN
39 PsiBlast_CBE 83.03100%-138 - C4 -4JVR 8.4 MDM2_HUMAN
16 PsiBlast_PDB 82.73100%-134 - C4 -4ERF 7.3 MDM2_HUMAN
15 PsiBlast_PDB 82.61100%-148 - C4 -4ERE 9.2 MDM2_HUMAN
76 HHSearch 82.6098%-135 - C4 -2AXI 11.4 MDM2_HUMAN
29 PsiBlast_CBE 82.4498%-135 - C4 -4HFZ 7.7 MDM2_HUMAN
45 PsiBlast_CBE 81.86100%-131 - C4 -3LBL 7.7 MDM2_HUMAN
30 PsiBlast_CBE 81.83100%-140 - C4 -4JWR 7.3 MDM2_HUMAN
20 PsiBlast_PDB 81.77100%-128 - C4 -4JVE 8.8 MDM2_HUMAN
51 PsiBlast_CBE 81.69100%-149 - C4 -3V3B 10.2 MDM2_HUMAN
38 PsiBlast_CBE 81.68100%-138 - C4 -4JVR - MDM2_HUMAN
31 PsiBlast_CBE 81.54100%-139 - C4 -4JWR 7.3 MDM2_HUMAN
52 PsiBlast_CBE 81.46100%-139 - C4 -3JZS 8.3 MDM2_HUMAN
12 PsiBlast_PDB 81.26100%-140 - C4 -4JWR 7.3 MDM2_HUMAN
7 PsiBlast_PDB 80.89100%-138 - C4 -2GV2 9.4 MDM2_HUMAN
9 PsiBlast_PDB 80.86100%-143 - C4 -3G03 3.3 MDM2_HUMAN
6 PsiBlast_PDB 80.68100%-135 - C4 -1T4F 8.6 MDM2_HUMAN
50 PsiBlast_CBE 80.29100%-140 - C4 -3V3B 10.3 MDM2_HUMAN
18 PsiBlast_PDB 80.23100%-144 - C4 -4JV7 8.2 MDM2_HUMAN
43 PsiBlast_CBE 80.08100%-146 - C4 -3LBL 8.5 MDM2_HUMAN
53 PsiBlast_CBE 79.70100%-147 - C4 -4MDQ 7.0 MDM2_HUMAN
19 PsiBlast_PDB 79.40100%-148 - C4 -4JV9 7.7 MDM2_HUMAN
5 PsiBlast_PDB 79.27100%-140 - C4 -1YCR 8.8 MDM2_HUMAN
57 PsiBlast_CBE 79.03100%-143 - C4 -3LNZ 8.4 MDM2_HUMAN
28 PsiBlast_CBE 78.65100%-144 - C4 -3G03 7.8 MDM2_HUMAN
56 PsiBlast_CBE 78.35100%-136 - C4 -3TPX 9.9 MDM2_HUMAN
49 PsiBlast_CBE 78.2298%-143 - C4 -3LBK 8.0 MDM2_HUMAN
59 PsiBlast_CBE 77.93100%-146 - C4 -3LNZ 9.0 MDM2_HUMAN
58 PsiBlast_CBE 77.92100%-153 - C4 -3LNZ 8.4 MDM2_HUMAN
11 PsiBlast_PDB 77.8298%-144 - C4 -4HFZ 7.8 MDM2_HUMAN
60 PsiBlast_CBE 77.27100%-143 - C4 -3LNZ 8.2 MDM2_HUMAN
54 PsiBlast_CBE 77.19100%-135 - C4 -3TPX 9.9 MDM2_HUMAN
55 PsiBlast_CBE 76.82100%-136 - C4 -3TPX 2.6 MDM2_HUMAN
79 HHSearch 74.8476%-138 * C4 *4J74 6.0 MDM2_XENLA
77 HHSearch 72.9568%-124 - C4 -1YCQ 4.1 MDM2_XENLA
73 HHSearch 71.6940%-138 - C4 -2Z5S 6.8 MDM4_DANRE
78 HHSearch 71.0652%-130 - C4 -4N5T 10.7 MDM4_DANRE
74 HHSearch 67.4542%-135 - C4 -3DAC 3.6 MDM4_DANRE
75 HHSearch 67.2152%-141 - C4 -3FEA 8.0 MDM4_HUMAN