@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00648_CAN2_H: (2014-09-13 )
MAGIAAKLAKDREAAEGLGSHDRAIKYLNQDYEALRNECLEAGTLFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELKKPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAEEVESNGSLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSGQTNIHLSKNFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKADYQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQLDPENTGTIELDLISWLCFSVL

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GRD_A_7(2R9C)
CAN1_RAT
[Raw transfer]



K2Z_A_7(2R9F)
CAN1_RAT
[Raw transfer]



E64_A_4(1TLO)
CAN1_RAT
[Raw transfer]



D7G_A_4(2G8J)
CAN1_RAT
[Raw transfer]



NQG_A_4(2NQG)
CAN1_RAT
[Raw transfer]



NQI_A_4(2NQI)
CAN1_RAT
[Raw transfer]



0M6_A_4(2G8E)
CAN1_RAT
[Raw transfer]



C1N_A_4(1ZCM)
CAN1_HUMAN
[Raw transfer]



BME_B_8(2ARY)
CAN1_HUMAN
[Raw transfer]



BME_A_4(1ZIV)
CAN9_HUMAN
[Raw transfer]



BME_A_4(1ZIV)
CAN9_HUMAN
[Raw transfer]



MES_A_5(2G8E)
CAN1_RAT
[Raw transfer]



CHAIN_D_3(2NQA)
CAN2_HUMAN
[Raw transfer]
-
CHAIN_D_3(2NQA)
CAN2_HUMAN
[Raw transfer]
-
CHAIN_B_2(1TL9)
CAN1_RAT
[Raw transfer]
-
CHAIN_D_3(2P0R)
CAN9_HUMAN
[Raw transfer]
-
10 PsiBlast_PDB 52.4970% -90 - C2 -2NQG 3.6 CAN1_RAT
22 PsiBlast_CBE 52.4471% -92 - C2 -2ARY 2.6 CAN1_HUMAN
13 PsiBlast_PDB 52.3370% -88 - C2 -2R9F 5.9 CAN1_RAT
35 HHSearch 52.1774% -93 - C2 -2NQA 3.9 CAN2_HUMAN
7 PsiBlast_PDB 52.1670% -87 - C2 -1TLO 3.0 CAN1_RAT
11 PsiBlast_PDB 52.0370% -87 - C2 -2NQI 2.1 CAN1_RAT
12 PsiBlast_PDB 51.9970% -88 - C2 -2R9C 6.7 CAN1_RAT
8 PsiBlast_PDB 51.9470% -84 - C2 -2G8E 2.9 CAN1_RAT
9 PsiBlast_PDB 51.8870% -86 - C2 -2G8J 4.2 CAN1_RAT
14 PsiBlast_PDB 51.6271% -87 - C2 -1ZCM 3.3 CAN1_HUMAN
6 PsiBlast_PDB 51.4970% -83 - C2 -1TL9 4.5 CAN1_RAT
17 PsiBlast_PDB 47.9558% -78 - C2 -2P0R 3.8 CAN9_HUMAN
36 HHSearch 46.8259% -92 - C2 -1ZIV 2.7 CAN9_HUMAN