@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00659_PLK2_H: (2014-09-14 )
MELLRTITYQPAASTKMCEQALGKGCGADSKKKRPPQPPEESQPPQSQAQVPPAAPHHHHHHSHSGPEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEDIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSSELKNRMEYALNMLLQRCN

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]



R78_A_2(4I5M)
PLK2_HUMAN
[Raw transfer]



1C8_A_2(4I6H)
PLK2_HUMAN
[Raw transfer]



1C7_A_2(4I6F)
PLK2_HUMAN
[Raw transfer]



1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]



1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]



2FR_A_2(3DBC)
?
[Raw transfer]



939_A_4(4A4L)
PLK1_HUMAN
[Raw transfer]



FRS_A_2(3DB6)
?
[Raw transfer]



3FR_A_2(3DBD)
?
[Raw transfer]



626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]



11G_A_2(4I6B)
PLK2_HUMAN
[Raw transfer]



R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]



ADP_A_2(3D5W)
?
[Raw transfer]



9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]



937_A_2(2YAC)
PLK1_HUMAN
[Raw transfer]



9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]



1FR_A_2(3DB8)
?
[Raw transfer]



5FR_A_2(3DBF)
?
[Raw transfer]



4FR_A_2(3DBE)
?
[Raw transfer]



KWT_A_2(3D5X)
?
[Raw transfer]



TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
2 PsiBlast_PDB 90.3797%-115 - C1 -4I6B 5.6 PLK2_HUMAN
32 HHSearch 89.1398%-115 - C1 -4I5P 7.0 PLK2_HUMAN
3 PsiBlast_PDB 89.0297%-114 - C1 -4I6F 8.9 PLK2_HUMAN
1 PsiBlast_PDB 87.1097%-115 - C1 -4I6H 7.9 PLK2_HUMAN
4 PsiBlast_PDB 85.0597%-117 - C1 -4I5M 8.6 PLK2_HUMAN
33 HHSearch 80.2650%-115 - C1 -2RKU 6.5 PLK1_HUMAN
34 HHSearch 78.7249%-118 - C1 -2OWB 8.3 PLK1_HUMAN
13 PsiBlast_PDB 78.6950%-117 - C1 -3DB6 7.3 ?
8 PsiBlast_PDB 78.4348%-114 - C1 -3D5W 5.3 ?
31 HHSearch 78.2468%-109 - C1 -4B6L 8.5 PLK3_HUMAN
19 PsiBlast_PDB 77.8850%-116 - C1 -2YAC 7.3 PLK1_HUMAN
20 PsiBlast_PDB 77.1350%-114 - C1 -4A4L 5.7 PLK1_HUMAN
14 PsiBlast_PDB 75.8950%-118 - C1 -3D5X 4.1 ?
15 PsiBlast_PDB 74.0850%-116 - C1 -3DBE 6.4 ?
12 PsiBlast_PDB 72.6148%-126 - C1 -3DBD 9.0 ?
16 PsiBlast_PDB 71.7950%-127 - C1 -3DBF 6.6 ?
11 PsiBlast_PDB 71.4048%-125 - C1 -3DBC 7.6 ?
10 PsiBlast_PDB 69.7948%-125 - C1 -3DB8 7.9 ?
38 HHSearch 54.2330%-102 * C1 *4GV1 Error AKT1_HUMAN