@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00704_CHIA_M: (2014-09-14 )
MAKLLLVTGLALLLNAQLGSAYNLICYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNNEITTIEWNDVTLYKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKEMREAFEQEAIESNRPRLMVTAAVAGGISNIQAGYEIPELSKYLDFIHVMTYDLHGSWEGYTGENSPLYKYPTETGSNAYLNVDYVMNYWKNNGAPAEKLIVGFPEYGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEICTFLRSGATEVWDASQEVPYAYKANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTLNKALGISTEGCTAPDVPSEPVTTPPGSGSGGGSSGGSSGGSGFCADKADGLYPVADDRNAFWQCINGITYQQHCQAGLVFDTSCNCCNWP

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMI_A_5(3FY1)
CHIA_HUMAN
[Raw transfer]




AMI_B_8(3FY1)
CHIA_HUMAN
[Raw transfer]




AMI_A_3(1HKK)
CHIT1_HUMAN
[Raw transfer]




RME_B_6(3RME)
CHIA_HUMAN
[Raw transfer]




SUGAR_N_2(1LG1)
CHIT1_HUMAN
[Raw transfer]

-

GOL_B_5(3RME)
CHIA_HUMAN
[Raw transfer]




GOL_A_3(3RME)
CHIA_HUMAN
[Raw transfer]




RME_A_4(3RME)
CHIA_HUMAN
[Raw transfer]




RM8_A_3(3RM8)
CHIA_HUMAN
[Raw transfer]




RM8_B_4(3RM8)
CHIA_HUMAN
[Raw transfer]




3RM_B_4(3RM4)
CHIA_HUMAN
[Raw transfer]




ALI_A_4(1HKI)
CHIT1_HUMAN
[Raw transfer]




3RM_A_3(3RM4)
CHIA_HUMAN
[Raw transfer]




AMI_A_4(1HKJ)
CHIT1_HUMAN
[Raw transfer]




613_B_4(3RM9)
CHIA_HUMAN
[Raw transfer]




NAA_B_7(3FY1)
CHIA_HUMAN
[Raw transfer]




613_A_3(3RM9)
CHIA_HUMAN
[Raw transfer]




NAA_A_4(3FY1)
CHIA_HUMAN
[Raw transfer]




SUGAR_A_2(1HKK)
CHIT1_HUMAN
[Raw transfer]

-

NAG_A_2(1HKI)
CHIT1_HUMAN
[Raw transfer]




NAA_A_2(1HKJ)
CHIT1_HUMAN
[Raw transfer]




GCS_A_2(1E9L)
CH3L3_MOUSE
[Raw transfer]




EDO_B_2(1LG2)
CHIT1_HUMAN
[Raw transfer]




MPD_A_3(2PI6)
CH3L1_SHEEP
[Raw transfer]




EDO_E_5(1LG2)
CHIT1_HUMAN
[Raw transfer]




EDO_C_3(1LG2)
CHIT1_HUMAN
[Raw transfer]




NA1_A_3(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_A_3(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_B_6(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_A_3(1HKI)
CHIT1_HUMAN
[Raw transfer]




NA1_A_3(1HKJ)
CHIT1_HUMAN
[Raw transfer]




SUGAR_A_2(2PI6)
CH3L1_SHEEP
[Raw transfer]

-

6 PsiBlast_PDB 97.2483%-100 - C1 -3RME 5.1 CHIA_HUMAN
25 PsiBlast_CBE 95.8483%-102 - C1 -3FY1 4.4 CHIA_HUMAN
5 PsiBlast_PDB 95.7083% -98 - C1 -3RM9 4.8 CHIA_HUMAN
4 PsiBlast_PDB 95.7083% -97 - C1 -3RM8 8.3 CHIA_HUMAN
23 PsiBlast_CBE 95.6983%-101 - C1 -3RM8 8.4 CHIA_HUMAN
22 PsiBlast_CBE 95.6783%-102 - C1 -3RM9 4.9 CHIA_HUMAN
24 PsiBlast_CBE 95.6483% -98 - C1 -3RM4 7.2 CHIA_HUMAN
21 PsiBlast_CBE 95.6383%-102 - C1 -3RME 5.0 CHIA_HUMAN
48 HHSearch 95.5184% -99 - C1 -3FY1 4.3 CHIA_HUMAN
3 PsiBlast_PDB 95.4183%-101 - C1 -3RM4 6.7 CHIA_HUMAN
9 PsiBlast_PDB 86.1666% -91 - C1 -1E9L 1.3 CH3L3_MOUSE
15 PsiBlast_PDB 80.8155% -95 - C1 -1LG2 3.4 CHIT1_HUMAN
50 HHSearch 80.1652%-100 * C1 *2PI6 3.4 CH3L1_SHEEP
17 PsiBlast_PDB 80.1355% -91 - C1 -1HKI 3.5 CHIT1_HUMAN
14 PsiBlast_PDB 79.4855% -92 - C1 -1LG1 6.0 CHIT1_HUMAN
20 PsiBlast_PDB 79.0755% -91 - C1 -1HKK 5.3 CHIT1_HUMAN
18 PsiBlast_PDB 78.5655% -91 - C1 -1HKJ 4.2 CHIT1_HUMAN
47 HHSearch 72.0939% -90 - C1 -3W4R - ?
54 HHSearch 70.7731% -83 - C1 -1ITX - CHIA1_BACCI