@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00704_CHIA_S: (2014-09-14 )
MRKFNKPLLALLIGSTLCSAAQAAAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAGKDKIDKVAYNVAQNSMDHIFLMSYDFYGPFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKVVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWKNGIVDYRQIAGQFMSGEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AO3_B_2(1X6N)
CHIA_SERMA
[Raw transfer]



NAG_A_10(2WLZ)
CHIA_SERMA
[Raw transfer]



SUGAR_A_2(1EHN)
CHIA_SERMA
[Raw transfer]
-
SN5_A_10(2WLY)
CHIA_SERMA
[Raw transfer]



AMI_A_3(1FFQ)
CHIA_SERMA
[Raw transfer]



SUGAR_A_2(1FFQ)
CHIA_SERMA
[Raw transfer]
-
SUGAR_B_2(1NH6)
CHIA_SERMA
[Raw transfer]
-
SN5_A_3(2WK2)
CHIA_SERMA
[Raw transfer]



SUGAR_A_2(1EIB)
CHIA_SERMA
[Raw transfer]
-
GOL_A_3(3ARP)
?
[Raw transfer]



SUGAR_A_2(2WM0)
CHIA_SERMA
[Raw transfer]
-
SUGAR_A_2(1FFR)
CHIA_SERMA
[Raw transfer]
-
NAG_A_2(1K9T)
CHIA_SERMA
[Raw transfer]



GOL_A_3(3ARQ)
?
[Raw transfer]



NGT_A_9(2WLZ)
CHIA_SERMA
[Raw transfer]



NGT_A_3(2WM0)
CHIA_SERMA
[Raw transfer]



GOL_A_8(1ITX)
CHIA1_BACCI
[Raw transfer]



GOL_A_8(1GOI)
CHIB_SERMA
[Raw transfer]



NGT_A_11(2WLY)
CHIA_SERMA
[Raw transfer]



NGT_A_4(2WK2)
CHIA_SERMA
[Raw transfer]



CFF_A_2(3G6M)
?
[Raw transfer]



SUGAR_A_4(1K9T)
CHIA_SERMA
[Raw transfer]
-
EDO_A_6(3ALF)
?
[Raw transfer]



DM5_A_2(3ARQ)
?
[Raw transfer]



CFF_A_3(3G6M)
?
[Raw transfer]



DIO_A_4(2WLZ)
CHIA_SERMA
[Raw transfer]



DIO_A_4(2WLY)
CHIA_SERMA
[Raw transfer]



MPD_A_3(2PI6)
CH3L1_SHEEP
[Raw transfer]



DEQ_A_2(3ARP)
?
[Raw transfer]



SN5_A_2(2WK2)
CHIA_SERMA
[Raw transfer]
9 PsiBlast_PDB 99.1898% -82 - C1 -1FFQ 5.6 CHIA_SERMA
7 PsiBlast_PDB 98.9398% -80 - C1 -2WM0 5.1 CHIA_SERMA
6 PsiBlast_PDB 98.7998% -81 - C1 -2WLZ 4.1 CHIA_SERMA
14 PsiBlast_PDB 98.6998% -81 - C1 -1EIB 12.6 CHIA_SERMA
12 PsiBlast_PDB 98.2398% -80 - C1 -1EHN 12.6 CHIA_SERMA
11 PsiBlast_PDB 98.2298% -81 - C1 -1FFR 6.1 CHIA_SERMA
15 PsiBlast_PDB 98.2098% -79 - C1 -1NH6 12.5 CHIA_SERMA
5 PsiBlast_PDB 98.1798% -80 - C1 -2WLY 3.8 CHIA_SERMA
3 PsiBlast_PDB 98.0598% -80 - C1 -1X6N 8.8 CHIA_SERMA
13 PsiBlast_PDB 97.9198% -80 - C1 -1K9T 3.4 CHIA_SERMA
10 PsiBlast_PDB 97.8398% -80 - C1 -2WK2 4.0 CHIA_SERMA
19 PsiBlast_PDB 80.3351% -73 - C1 -3ARQ 6.0 ?
18 PsiBlast_PDB 80.1551% -73 - C1 -3ARP 8.6 ?
38 HHSearch 50.9834% -74 - C1 -3G6M 5.2 ?
50 HHSearch 49.9830% -77 - C1 -1GOI 3.5 CHIB_SERMA
35 HHSearch 45.1033% -58 - C1 -1ITX 2.4 CHIA1_BACCI