@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00704_CHIT1_: (2014-09-15 )
MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUGAR_N_2(1LG1)
CHIT1_HUMAN
[Raw transfer]
-
AMI_A_3(1HKK)
CHIT1_HUMAN
[Raw transfer]



ALI_A_4(1HKI)
CHIT1_HUMAN
[Raw transfer]



AMI_A_5(3FY1)
CHIA_HUMAN
[Raw transfer]



AMI_A_5(3FY1)
CHIA_HUMAN
[Raw transfer]



AMI_A_4(1HKJ)
CHIT1_HUMAN
[Raw transfer]



GOL_A_8(1ITX)
CHIA1_BACCI
[Raw transfer]



GOL_A_3(3RME)
CHIA_HUMAN
[Raw transfer]



RME_A_4(3RME)
CHIA_HUMAN
[Raw transfer]



CFF_A_2(3G6M)
?
[Raw transfer]



RM8_A_3(3RM8)
CHIA_HUMAN
[Raw transfer]



3RM_A_3(3RM4)
CHIA_HUMAN
[Raw transfer]



NAG_A_2(1HKI)
CHIT1_HUMAN
[Raw transfer]



NAA_A_2(1HKJ)
CHIT1_HUMAN
[Raw transfer]



SUGAR_A_2(1HKK)
CHIT1_HUMAN
[Raw transfer]
-
SUGAR_A_4(1HKK)
CHIT1_HUMAN
[Raw transfer]
-
EDO_B_2(1LG2)
CHIT1_HUMAN
[Raw transfer]



GCS_A_2(1E9L)
CH3L3_MOUSE
[Raw transfer]



NAA_A_4(3FY1)
CHIA_HUMAN
[Raw transfer]



EDO_A_6(3ALF)
?
[Raw transfer]



MPD_A_3(2PI6)
CH3L1_SHEEP
[Raw transfer]



613_A_3(3RM9)
CHIA_HUMAN
[Raw transfer]



EDO_E_5(1LG2)
CHIT1_HUMAN
[Raw transfer]



CFF_A_3(3G6M)
?
[Raw transfer]



MPD_A_4(2PI6)
CH3L1_SHEEP
[Raw transfer]



NA1_A_3(1HKI)
CHIT1_HUMAN
[Raw transfer]



NA1_A_3(1HKJ)
CHIT1_HUMAN
[Raw transfer]



NA1_A_3(3FY1)
CHIA_HUMAN
[Raw transfer]



SUGAR_A_2(2PI6)
CH3L1_SHEEP
[Raw transfer]
-
5 PsiBlast_PDB 98.69100% -92 - C1 -1LG2 3.4 CHIT1_HUMAN
10 PsiBlast_PDB 97.5599% -90 - C1 -1HKK 4.8 CHIT1_HUMAN
4 PsiBlast_PDB 97.00100% -89 - C1 -1LG1 5.7 CHIT1_HUMAN
7 PsiBlast_PDB 96.9799% -89 - C1 -1HKI 3.5 CHIT1_HUMAN
8 PsiBlast_PDB 96.6299% -88 - C1 -1HKJ 4.2 CHIT1_HUMAN
16 PsiBlast_PDB 85.2455% -85 - C1 -3RME 4.9 CHIA_HUMAN
32 HHSearch 85.1356% -84 - C1 -3FY1 4.2 CHIA_HUMAN
14 PsiBlast_PDB 84.9955% -84 - C1 -3RM8 7.6 CHIA_HUMAN
13 PsiBlast_PDB 84.9255% -87 - C1 -3RM4 6.6 CHIA_HUMAN
15 PsiBlast_PDB 84.2755% -83 - C1 -3RM9 4.3 CHIA_HUMAN
34 HHSearch 80.4353% -89 - C1 -2PI6 3.4 CH3L1_SHEEP
21 Fugue 77.3148% -89 - C1 -1E9L 1.3 CH3L3_MOUSE
38 HHSearch 72.9739% -79 * C1 *1ITX 2.4 CHIA1_BACCI
41 HHSearch 70.4230% -84 - C1 -1GOI - CHIB_SERMA
40 HHSearch 64.1932% -69 - C1 -1KFW - ?
49 HHSearch 63.7834% -79 - C1 -3G6M 5.2 ?
45 HHSearch 63.5531% -77 - C1 -3ALF 2.6 ?