@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00709_PURA2_: (2014-09-15 )
MAFAETYPAASSLPNGDCGRPRARPGGNRVTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVVVDSVEYDFHLLPSGIINPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAADGIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYKSIYPTLEIDIEGELQKLKGYMEKIKPMVRDGVYFLYEALHGPPKKILVEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGREFGVTTGRKRRCGWLDLVLLKYAHMINGFTALALTKLDILDMFTEIKVGVAYKLDGEIIPHIPANQEVLNKVEVQYKTLPGWNTDISNARAFKELPVNAQNYVRFIEDELQIPVKWIGVGKSRESMIQLF

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMO_A_3(1LON)
PURA1_MOUSE
[Raw transfer]




DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]




IMO_A_4(1P9B)
PURA_PLAFA
[Raw transfer]




IMO_A_5(1LNY)
PURA1_MOUSE
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




IMO_A_4(1CG3)
PURA_ECOLI
[Raw transfer]




IMO_A_4(1CG1)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




IMO_A_3(1CG4)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




AMP_A_4(1MF0)
PURA1_MOUSE
[Raw transfer]




IMO_A_4(1CG0)
PURA_ECOLI
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




IMP_A_6(1CIB)
PURA_ECOLI
[Raw transfer]




IMP_A_6(1CH8)
PURA_ECOLI
[Raw transfer]




IMP_B_6(1IWE)
PURA1_MOUSE
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(1MEZ)
PURA1_MOUSE
[Raw transfer]




GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_4(1QF4)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1QF5)
PURA_ECOLI
[Raw transfer]




HDA_A_4(1LON)
PURA1_MOUSE
[Raw transfer]




HDA_A_5(1CIB)
PURA_ECOLI
[Raw transfer]




HDA_A_3(1CG1)
PURA_ECOLI
[Raw transfer]




HDA_A_5(1P9B)
PURA_PLAFA
[Raw transfer]




HDA_A_5(1CH8)
PURA_ECOLI
[Raw transfer]




HDA_A_4(1KKF)
PURA_ECOLI
[Raw transfer]




HDA_A_5(2GCQ)
PURA_ECOLI
[Raw transfer]




HDA_A_3(1CG3)
PURA_ECOLI
[Raw transfer]




HDA_A_3(1CG0)
PURA_ECOLI
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




EDO_A_5(4M9D)
PURA_BACAN
[Raw transfer]




41 HHSearch 98.46100%-120 - C1 -2V40 6.7 PURA2_HUMAN
30 PsiBlast_CBE 93.2075%-104 - C1 -1IWE 6.2 PURA1_MOUSE
29 PsiBlast_CBE 93.1375%-105 - C1 -1IWE 5.0 PURA1_MOUSE
28 PsiBlast_CBE 92.8875%-106 - C1 -1LNY 8.6 PURA1_MOUSE
27 PsiBlast_CBE 92.6975%-103 - C1 -1LNY 7.6 PURA1_MOUSE
25 PsiBlast_CBE 92.3675%-106 - C1 -1LOO 6.3 PURA1_MOUSE
22 PsiBlast_CBE 92.3575%-105 - C1 -1MF1 5.5 PURA1_MOUSE
23 PsiBlast_CBE 92.2875%-102 - C1 -1MF0 6.7 PURA1_MOUSE
21 PsiBlast_CBE 92.1575%-104 - C1 -2DGN 7.9 PURA1_MOUSE
26 PsiBlast_CBE 92.0775%-103 - C1 -1LON 8.7 PURA1_MOUSE
24 PsiBlast_CBE 92.0575%-105 - C1 -1MEZ 7.8 PURA1_MOUSE
44 HHSearch 81.9049%-104 - C1 -1DJ2 6.3 PURA_ARATH
6 PsiBlast_PDB 81.5142% -90 - C1 -1KKF 5.8 PURA_ECOLI
43 HHSearch 81.4243% -98 - C1 -4M9D 5.8 PURA_BACAN
11 PsiBlast_PDB 81.1842% -91 - C1 -1CIB 6.5 PURA_ECOLI
31 Fugue 81.0949% -99 - C1 -1DJ3 6.1 PURA_WHEAT
42 HHSearch 80.9946% -98 - C1 -1P9B 8.2 PURA_PLAFA
5 PsiBlast_PDB 80.8542% -90 - C1 -1KKB 5.3 PURA_ECOLI
4 PsiBlast_PDB 80.7542% -93 - C1 -1KJX 5.4 PURA_ECOLI
13 PsiBlast_PDB 80.7242% -92 - C1 -1SON 4.9 PURA_ECOLI
9 PsiBlast_PDB 80.4742% -93 - C1 -1QF4 6.9 PURA_ECOLI
12 PsiBlast_PDB 80.4642% -88 - C1 -2GCQ 7.2 PURA_ECOLI
17 PsiBlast_PDB 80.3142% -91 - C1 -1CG1 7.4 PURA_ECOLI
8 PsiBlast_PDB 80.1142% -89 - C1 -1CH8 6.6 PURA_ECOLI
19 PsiBlast_PDB 80.0941% -92 - C1 -1CG4 6.9 PURA_ECOLI
7 PsiBlast_PDB 80.0542% -88 - C1 -1CG0 7.9 PURA_ECOLI
18 PsiBlast_PDB 79.6741% -92 - C1 -1CG3 7.8 PURA_ECOLI
14 PsiBlast_PDB 79.6042% -90 - C1 -1SOO 4.7 PURA_ECOLI
10 PsiBlast_PDB 79.5342% -93 - C1 -1QF5 6.9 PURA_ECOLI
47 HHSearch 77.5842%-101 - C1 -3R7T 3.3 PURA_CAMJE