@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00753_BLAB_S: (2014-09-15 )
MSKLSVFFIFLFCSIATAAESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSN

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BDS_B_12(1JJT)
?
[Raw transfer]



BYS_B_12(1JJE)
?
[Raw transfer]



BDS_A_11(1JJT)
?
[Raw transfer]



BYS_A_11(1JJE)
?
[Raw transfer]



MCI_A_8(1DD6)
BLAB_SERMA
[Raw transfer]



ZZ7_A_3(4HL2)
BLAN1_KLEPN
[Raw transfer]



MCI_B_9(1DD6)
BLAB_SERMA
[Raw transfer]



C4H_A_7(2DOO)
BLAB_SERMA
[Raw transfer]



0WO_A_5(4EYB)
BLAN1_KLEPN
[Raw transfer]



CIT_A_5(1MQO)
BLA2_BACCE
[Raw transfer]



C4H_B_8(2DOO)
BLAB_SERMA
[Raw transfer]



ACY_A_13(1WUP)
BLAB_SERMA
[Raw transfer]



ACY_D_16(1WUP)
BLAB_SERMA
[Raw transfer]



ACY_B_14(1WUP)
BLAB_SERMA
[Raw transfer]



OPS_A_7(1VGN)
BLAB_SERMA
[Raw transfer]



ACY_C_15(1WUP)
BLAB_SERMA
[Raw transfer]



OPS_B_8(1VGN)
BLAB_SERMA
[Raw transfer]



ACY_A_4(1DDK)
?
[Raw transfer]
6 PsiBlast_PDB 97.25100% -88 - C1 -1JJE 7.2 ?
24 PsiBlast_CBE 96.94100% -91 - C1 -1DD6 6.3 BLAB_SERMA
2 PsiBlast_PDB 96.58100% -89 - C1 -1JJT 6.7 ?
28 PsiBlast_CBE 96.48100% -84 - C1 -1JJE 6.9 ?
1 PsiBlast_PDB 96.48100% -93 - C1 -1DD6 7.1 BLAB_SERMA
23 PsiBlast_CBE 96.31100% -88 - C1 -1JJT 7.7 ?
22 PsiBlast_CBE 96.27100% -88 - C1 -1VGN 2.9 BLAB_SERMA
4 PsiBlast_PDB 95.33100% -91 - C1 -2DOO 5.2 BLAB_SERMA
3 PsiBlast_PDB 95.21100% -89 - C1 -1VGN 3.6 BLAB_SERMA
21 PsiBlast_CBE 94.56100% -91 - C1 -2DOO 5.0 BLAB_SERMA
7 PsiBlast_PDB 92.37100% -90 - C1 -1DDK 3.2 ?
25 PsiBlast_CBE 91.9999% -89 - C1 -1WUP 3.6 BLAB_SERMA
27 PsiBlast_CBE 91.5899% -93 - C1 -1WUP 3.7 BLAB_SERMA
5 PsiBlast_PDB 91.4599% -88 - C1 -1WUP 3.6 BLAB_SERMA
26 PsiBlast_CBE 91.1799% -90 - C1 -1WUP 3.4 BLAB_SERMA
44 HHSearch 65.8737% -74 - C1 -1MQO 2.8 BLA2_BACCE
49 HHSearch 60.5535% -63 - C1 -4HL2 3.9 BLAN1_KLEPN
43 HHSearch 59.6235% -65 - C1 -4EYB 5.0 BLAN1_KLEPN