@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00787_P3C2A_: (2014-09-16 )
MAQISSNSGFKECPSSHPEPTRAKDVDKEEALQMEAEALAKLQKDRQVTDNQRGFELSSSTRKKAQVYNKQDYDLMVFPESDSQKRALDIDVEKLTQAELEKLLLDDSFETKKTPVLPVTPILSPSFSAQLYFRPTIQRGQWPPGLPGPSTYALPSIYPSTYSKQAAFQNGFNPRMPTFPSTEPIYLSLPGQSPYFSYPLTPATPFHPQGSLPIYRPVVSTDMAKLFDKIASTSEFLKNGKARTDLEITDSKVSNLQVSPKSEDISKFDWLDLDPLSKPKVDNVEVLDHEEEKNVSSLLAKDPWDAVLLEERSTANCHLERKVNGKSLSVATVTRSQSLNIRTTQLAKAQGHISQKDPNGTSSLPTGSSLLQEVEVQNEEMAAFCRSITKLKTKFPYTNHRTNPGYLLSPVTAQRNICGENASVKVSIDIEGFQLPVTFTCDVSSTVEIIIMQALCWVHDDLNQVDVGSYVLKVCGQEEVLQNNHCLGSHEHIQNCRKWDTEIRLQLLTFSAMCQNLARTAEDDETPVDLNKHLYQIEKPCKEAMTRHPVEELLDSYHNQVELALQIENQHRAVDQVIKAVRKICSALDGVETLAITESVKKLKRAVNLPRSKTADVTSLFGGEDTSRSSTRGSLNPENPVQVSINQLTAAIYDLLRLHANSGRSPTDCAQSSKSVKEAWTTTEQLQFTIFAAHGISSNWVSNYEKYYLICSLSHNGKDLFKPIQSKKVGTYKNFFYLIKWDELIIFPIQISQLPLESVLHLTLFGILNQSSGSSPDSNKQRKGPEALGKVSLPLFDFKRFLTCGTKLLYLWTSSHTNSVPGTVTKKGYVMERIVLQVDFPSPAFDIIYTTPQVDRSIIQQHNLETLENDIKGKLLDILHKDSSLGLSKEDKAFLWEKRYYCFKHPNCLPKILASAPNWKWVNLAKTYSLLHQWPALYPLIALELLDSKFADQEVRSLAVTWIEAISDDELTDLLPQFVQALKYEIYLNSSLVQFLLSRALGNIQIAHNLYWLLKDALHDVQFSTRYEHVLGALLSVGGKRLREELLKQTKLVQLLGGVAEKVRQASGSARQVVLQRSMERVQSFFQKNKCRLPLKPSLVAKELNIKSCSFFSSNAVPLKVTMVNADPMGEEINVMFKVGEDLRQDMLALQMIKIMDKIWLKEGLDLRMVIFKCLSTGRDRGMVELVPASDTLRKIQVEYGVTGSFKDKPLAEWLRKYNPSEEEYEKASENFIYSCAGCCVATYVLGICDRHNDNIMLRSTGHMFHIDFGKFLGHAQMFGSFKRDRAPFVLTSDMAYVINGGEKPTIRFQLFVDLCCQAYNLIRKQTNLFLNLLSLMIPSGLPELTSIQDLKYVRDALQPQTTDAEATIFFTRLIESSLGSIATKFNFFIHNLAQLRFSGLPSNDEPILSFSPKTYSFRQDGRIKEVSVFTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFPNRMVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHPLLRDEKAEGIARSADAGSFSPTPGQIGGAVKLSISYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDNHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGVTLPLKDFNLSKETVKWYQLTAATYL

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

WYE_A_4(3LJ3)
PK3CG_HUMAN
[Raw transfer]




FAZ_A_2(3R7R)
PK3CG_HUMAN
[Raw transfer]




EM7_A_3(4ANU)
PK3CG_HUMAN
[Raw transfer]




3PS_A_2(3PS6)
PK3CG_HUMAN
[Raw transfer]




GD9_A_3(2Y3A)
PK3CB_MOUSE
[Raw transfer]




QUE_A_2(1E8W)
PK3CG_PIG
[Raw transfer]




0TA_A_2(4FA6)
PK3CG_HUMAN
[Raw transfer]




ML8_A_2(3ML8)
PK3CG_HUMAN
[Raw transfer]




QK0_A_5(3QK0)
PK3CG_HUMAN
[Raw transfer]




ZIG_A_4(3L08)
PK3CG_HUMAN
[Raw transfer]




0TB_A_2(4FAD)
PK3CG_HUMAN
[Raw transfer]




3RZ_A_2(3PRZ)
PK3CG_HUMAN
[Raw transfer]




AJZ_A_3(3LS8)
PK3C3_HUMAN
[Raw transfer]




QJZ_A_2(3QJZ)
PK3CG_HUMAN
[Raw transfer]




980_A_2(3TL5)
PK3CG_HUMAN
[Raw transfer]




ATP_A_2(1E8X)
PK3CG_PIG
[Raw transfer]




O92_A_3(4ANW)
PK3CG_HUMAN
[Raw transfer]




41A_A_2(3DPD)
PK3CG_HUMAN
[Raw transfer]




7 PsiBlast_PDB 85.5535%-106 - C1 -3PRZ 4.9 PK3CG_HUMAN
8 PsiBlast_PDB 85.4935%-106 - C1 -3PS6 5.0 PK3CG_HUMAN
15 PsiBlast_PDB 85.1535%-104 - C1 -3QJZ 5.2 PK3CG_HUMAN
12 PsiBlast_PDB 84.9135%-104 - C1 -4FA6 6.0 PK3CG_HUMAN
13 PsiBlast_PDB 84.0235%-108 - C1 -4FAD 6.7 PK3CG_HUMAN
6 PsiBlast_PDB 83.8635%-107 - C1 -3L08 7.2 PK3CG_HUMAN
16 PsiBlast_PDB 83.8535%-106 - C1 -3QK0 8.0 PK3CG_HUMAN
2 PsiBlast_PDB 83.4535%-108 - C1 -1E8W 6.3 PK3CG_PIG
19 PsiBlast_PDB 83.3135%-102 - C1 -3LJ3 4.1 PK3CG_HUMAN
1 PsiBlast_PDB 83.1335%-105 - C1 -1E8X 4.9 PK3CG_PIG
20 PsiBlast_PDB 83.0335%-106 - C1 -3ML8 8.0 PK3CG_HUMAN
18 PsiBlast_PDB 82.8235%-104 - C1 -3DPD 4.8 PK3CG_HUMAN
9 PsiBlast_PDB 82.6135%-105 - C1 -3R7R 6.7 PK3CG_HUMAN
10 PsiBlast_PDB 82.5635%-100 - C1 -3TL5 5.7 PK3CG_HUMAN
4 PsiBlast_PDB 82.5035%-103 - C1 -4ANW 4.7 PK3CG_HUMAN
3 PsiBlast_PDB 81.7335%-104 - C1 -4ANU 4.4 PK3CG_HUMAN
41 HHSearch 67.4631%-111 - C1 -3LS8 5.4 PK3C3_HUMAN