@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00850_HDAC8_: (2014-09-16 )
MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TSN_B_12(3F0R)
HDAC8_HUMAN
[Raw transfer]



B3N_B_11(3F06)
HDAC8_HUMAN
[Raw transfer]



GOL_B_12(3MZ4)
HDAC8_HUMAN
[Raw transfer]



SHH_A_3(1T69)
HDAC8_HUMAN
[Raw transfer]



V5X_A_6(2V5X)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3EZT)
HDAC8_HUMAN
[Raw transfer]



V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]



B3N_A_5(3MZ7)
HDAC8_HUMAN
[Raw transfer]



AGE_B_12(3F07)
HDAC8_HUMAN
[Raw transfer]



B3N_A_5(3EW8)
HDAC8_HUMAN
[Raw transfer]



TSN_A_13(1T64)
HDAC8_HUMAN
[Raw transfer]



AGE_A_8(3F07)
HDAC8_HUMAN
[Raw transfer]



TSN_B_15(1T64)
HDAC8_HUMAN
[Raw transfer]



B3N_A_5(1T67)
HDAC8_HUMAN
[Raw transfer]



TSN_C_17(3F0R)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3F06)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]



GOL_A_6(3MZ7)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3EZP)
HDAC8_HUMAN
[Raw transfer]



B3N_A_5(3MZ6)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3MZ3)
HDAC8_HUMAN
[Raw transfer]



1DI_A_8(3SFH)
HDAC8_HUMAN
[Raw transfer]



0DI_A_2(3SFF)
HDAC8_HUMAN
[Raw transfer]



GOL_A_7(3MZ4)
HDAC8_HUMAN
[Raw transfer]



20Y_A_10(4LY1)
HDAC2_HUMAN
[Raw transfer]



B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]



TSN_B_13(3F0R)
HDAC8_HUMAN
[Raw transfer]



BME_B_12(3EZP)
HDAC8_HUMAN
[Raw transfer]



BME_B_12(3EZT)
HDAC8_HUMAN
[Raw transfer]



BME_A_7(3EZT)
HDAC8_HUMAN
[Raw transfer]



CHAIN_C_3(3RQD)
HDAC8_HUMAN
[Raw transfer]
-
TSN_B_16(1T64)
HDAC8_HUMAN
[Raw transfer]



BME_A_7(3EZP)
HDAC8_HUMAN
[Raw transfer]



V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]



TSN_A_7(3F0R)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3EZP)
HDAC8_HUMAN
[Raw transfer]



V5X_A_6(2V5X)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3EZT)
HDAC8_HUMAN
[Raw transfer]



B3N_A_6(3MZ3)
HDAC8_HUMAN
[Raw transfer]



CHAIN_G_3(2V5W)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_I_5(3EWF)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_I_5(3EWF)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_K_7(3EWF)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_C_3(3RQD)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_I_4(2V5W)
HDAC8_HUMAN
[Raw transfer]
-
CHAIN_J_6(3EWF)
HDAC8_HUMAN
[Raw transfer]
-
24 PsiBlast_CBE 98.0099%-125 - C4 -2V5W 2.6 HDAC8_HUMAN
34 PsiBlast_CBE 97.7499%-127 - C4 -3EWF 5.5 HDAC8_HUMAN
8 PsiBlast_CBE 97.66100%-129 - C4 -1T64 5.9 HDAC8_HUMAN
7 PsiBlast_CBE 97.39100%-132 - C4 -1T67 4.4 HDAC8_HUMAN
15 PsiBlast_CBE 97.22100%-123 - C4 -3F0R 5.7 HDAC8_HUMAN
32 PsiBlast_CBE 97.1899%-126 - C4 -3EWF - HDAC8_HUMAN
33 PsiBlast_CBE 97.1399%-126 - C4 -3EWF 1.4 HDAC8_HUMAN
30 PsiBlast_CBE 97.1099%-130 - C4 -3EW8 4.2 HDAC8_HUMAN
31 PsiBlast_CBE 97.0999%-127 - C4 -3EWF 1.8 HDAC8_HUMAN
36 PsiBlast_CBE 96.9499%-133 - C4 -3MZ6 4.1 HDAC8_HUMAN
25 PsiBlast_CBE 96.9499%-126 - C4 -2V5W 8.6 HDAC8_HUMAN
37 PsiBlast_CBE 96.9399%-131 - C4 -3MZ4 2.8 HDAC8_HUMAN
35 PsiBlast_CBE 96.9299%-132 - C4 -3MZ7 3.4 HDAC8_HUMAN
38 PsiBlast_CBE 96.8699%-133 - C4 -3MZ4 4.2 HDAC8_HUMAN
6 PsiBlast_CBE 96.78100%-133 - C4 -1T69 3.7 HDAC8_HUMAN
9 PsiBlast_CBE 96.68100%-126 - C4 -1T64 5.8 HDAC8_HUMAN
18 PsiBlast_CBE 96.67100%-127 - C4 -3F07 4.8 HDAC8_HUMAN
16 PsiBlast_CBE 96.61100%-125 - C4 -3F0R 5.2 HDAC8_HUMAN
29 PsiBlast_CBE 96.5999%-133 - C4 -3F06 4.1 HDAC8_HUMAN
11 PsiBlast_CBE 96.59100%-132 - C4 -3RQD 5.3 HDAC8_HUMAN
28 PsiBlast_CBE 96.5899%-132 - C4 -3F06 4.3 HDAC8_HUMAN
10 PsiBlast_CBE 96.58100%-131 - C4 -3RQD 2.7 HDAC8_HUMAN
21 PsiBlast_CBE 96.3999%-132 - C4 -3EZP 4.2 HDAC8_HUMAN
26 PsiBlast_CBE 96.3499%-134 - C4 -2V5X 5.9 HDAC8_HUMAN
27 PsiBlast_CBE 96.2899%-128 - C4 -2V5X 7.1 HDAC8_HUMAN
20 PsiBlast_CBE 96.2799%-132 - C4 -3EZP 3.0 HDAC8_HUMAN
23 PsiBlast_CBE 96.0799%-131 - C4 -3EZT 3.9 HDAC8_HUMAN
19 PsiBlast_CBE 96.02100%-126 - C4 -3F07 4.4 HDAC8_HUMAN
22 PsiBlast_CBE 96.0199%-131 - C4 -3EZT 2.2 HDAC8_HUMAN
13 PsiBlast_CBE 95.74100%-131 - C4 -3MZ3 4.7 HDAC8_HUMAN
2 PsiBlast_PDB 95.67100%-131 - C4 -3SFH 7.7 HDAC8_HUMAN
14 PsiBlast_CBE 95.65100%-130 - C4 -3F0R 5.5 HDAC8_HUMAN
1 PsiBlast_PDB 95.18100%-136 - C4 -3SFF 8.0 HDAC8_HUMAN
12 PsiBlast_CBE 95.10100%-131 - C4 -3MZ3 2.2 HDAC8_HUMAN
51 HHSearch 76.8541%-113 - C4 -4LY1 6.3 HDAC2_HUMAN