@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01030_ERBB4_: (2014-09-19 )
LETELVEPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQNLLDEEDLEDMMDAEEYLVPQAFNIPPPIYTSRARIDSNRSEIGHSPPPAYTPMSGNQFVYRDGGFAAEQGVSVPYRAPTSTIPEAPVAQGATAEIFDDSCCNGTLRKPVAPHVQEDSSTQRYSADPTVFAPERSPRGELDEEGYMTPMRDKPKQEYLNPVEENPFVSRRKNGDLQALDNPEYHNASNGPPKAEDEYVNEPLYLNTFANTLGKAEYLKNNILSMPEKAKKAFDNPDYWNHSLPPRSTLQHPDYLQEYSTKYFYKQNGRIRPIVAENPEYLSEFSLKPGTVLPPPPYRHRNTVV

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KJR_A_2(4JR3)

[Raw transfer]




W2R_A_2(3W2S)

[Raw transfer]




KJV_A_2(4JRV)

[Raw transfer]




KJ8_A_2(4JQ8)

[Raw transfer]




ANP_C_10(3GT8)
EGFR_HUMAN
[Raw transfer]




W19_A_2(3W33)

[Raw transfer]




ITI_A_9(3LZB)
EGFR_HUMAN
[Raw transfer]




GW7_A_3(2R4B)
ERBB4_HUMAN
[Raw transfer]




AEE_A_2(2ITP)

[Raw transfer]




GW7_B_4(2R4B)

[Raw transfer]




AEE_A_2(2J6M)

[Raw transfer]




KJQ_A_2(4JQ7)

[Raw transfer]




AEE_A_2(2ITT)

[Raw transfer]




03P_A_5(3POZ)

[Raw transfer]




W32_A_2(3W32)

[Raw transfer]




FMM_A_4(1XKK)

[Raw transfer]




AQ4_A_2(1M17)

[Raw transfer]




FMM_D_4(3BBT)

[Raw transfer]




1WY_A_2(4LI5)

[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




STU_A_2(2ITQ)

[Raw transfer]




ANP_A_3(3KEX)
ERBB3_HUMAN
[Raw transfer]




ANP_A_3(2ITN)

[Raw transfer]




AQ4_A_2(4HJO)

[Raw transfer]




IRE_A_2(4I22)

[Raw transfer]




IRE_A_2(2ITY)

[Raw transfer]




112_B_4(2GS6)

[Raw transfer]




ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]




ANP_B_17(2GS7)

[Raw transfer]




IRE_A_2(2ITO)

[Raw transfer]




FMM_B_3(3BBT)
ERBB4_HUMAN
[Raw transfer]




03P_C_6(3RCD)
ERBB2_HUMAN
[Raw transfer]




1C9_A_3(4I24)
EGFR_HUMAN
[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




ANP_A_2(2ITV)

[Raw transfer]




0UN_A_3(3IKA)
EGFR_HUMAN
[Raw transfer]




1C9_B_4(4I24)

[Raw transfer]




DJK_A_2(4LQM)
?
[Raw transfer]




03P_A_5(3RCD)
ERBB2_HUMAN
[Raw transfer]




ANP_A_2(3VJN)

[Raw transfer]




ANP_A_16(2GS7)
EGFR_HUMAN
[Raw transfer]




YUN_A_3(4LL0)
EGFR_HUMAN
[Raw transfer]




ANP_A_2(3VJO)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




1C9_A_2(4I23)

[Raw transfer]




ANP_A_2(2ITX)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




0WN_A_2(4G5J)

[Raw transfer]




0WN_A_3(4G5P)
EGFR_HUMAN
[Raw transfer]




0VF_A_2(4FYO)

[Raw transfer]




IRE_A_2(3UG2)

[Raw transfer]




VGH_A_2(3ZBF)

[Raw transfer]




STU_A_2(2ITU)

[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




PEG_C_6(3BCE)

[Raw transfer]




MES_A_2(3UG1)

[Raw transfer]




MES_A_3(3UG2)

[Raw transfer]




CHAIN_B_2(2GS6)

[Raw transfer]

-

4 PsiBlast_PDB 93.08100%-141 - C3 -2R4B 9.8 ERBB4_HUMAN
21 PsiBlast_CBE 92.55100%-136 - C3 -3BCE 2.8
23 PsiBlast_CBE 92.14100%-141 - C3 -2R4B 9.4
10 PsiBlast_PDB 90.6377%-132 - C3 -1M17 5.7
27 PsiBlast_CBE 90.3177%-126 - C3 -2GS6 4.4
46 PsiBlast_CBE 90.2877%-137 - C3 -3VJN 3.8
25 PsiBlast_CBE 90.2477%-124 - C3 -3W32 10.6
34 PsiBlast_CBE 90.0177%-134 - C3 -4JR3 9.5
6 PsiBlast_PDB 89.9177%-123 - C3 -3IKA 5.4 EGFR_HUMAN
33 PsiBlast_CBE 89.8877%-137 - C3 -4JRV 9.7
1 PsiBlast_PDB 89.88100%-145 - C3 -3BBT 8.2 ERBB4_HUMAN
11 PsiBlast_PDB 89.6577%-129 - C3 -4I23 6.6
45 PsiBlast_CBE 89.6377%-133 - C3 -2ITN 4.9
51 PsiBlast_CBE 89.2777%-132 - C3 -2ITV 5.1
49 PsiBlast_CBE 89.1977%-134 - C3 -4G5P 6.1 EGFR_HUMAN
35 PsiBlast_CBE 89.1977%-134 - C3 -4JQ8 10.0
47 PsiBlast_CBE 89.0577%-132 - C3 -3UG2 6.1
52 PsiBlast_CBE 88.8677%-130 - C3 -2ITU 6.9
36 PsiBlast_CBE 88.8177%-131 - C3 -4JQ7 8.9
7 PsiBlast_PDB 88.7977%-126 - C3 -3VJO 3.6
53 PsiBlast_CBE 88.7677%-133 - C3 -2ITT 7.8
16 PsiBlast_PDB 88.7277%-125 - C3 -2ITX 4.4
26 PsiBlast_CBE 88.6577%-133 - C3 -3W2S 11.5
44 PsiBlast_CBE 88.5977%-129 - C3 -2ITO 6.9
18 PsiBlast_PDB 88.4977%-124 - C3 -2J6M 6.7
8 PsiBlast_PDB 88.4677%-131 - C3 -4LQM 5.6 ?
17 PsiBlast_PDB 88.4277%-133 - C3 -2ITY 6.3
24 PsiBlast_CBE 88.3577%-136 - C3 -3W33 10.2
42 PsiBlast_CBE 88.1977%-128 - C3 -2ITQ 7.5
43 PsiBlast_CBE 88.1777%-127 - C3 -2ITP 8.2
13 PsiBlast_PDB 87.7577%-124 - C3 -4LI5 6.8
19 PsiBlast_PDB 87.6077%-136 - C3 -3POZ 10.6
48 PsiBlast_CBE 87.3677%-127 - C3 -3UG1 2.4
55 PsiBlast_CBE 87.3477%-134 - C3 -2GS7 4.6
12 PsiBlast_PDB 87.3077%-139 - C3 -1XKK 10.5
22 PsiBlast_CBE 86.45100%-147 - C3 -3BBT 8.4
30 PsiBlast_CBE 85.8877%-122 - C3 -4G5J 5.8
54 PsiBlast_CBE 85.6477%-131 - C3 -3GT8 5.4 EGFR_HUMAN
56 PsiBlast_CBE 85.3977%-133 - C3 -2GS7 4.5 EGFR_HUMAN
28 PsiBlast_CBE 84.4877%-127 - C3 -4LL0 4.7 EGFR_HUMAN
32 PsiBlast_CBE 83.8477%-128 - C3 -4I24 6.1 EGFR_HUMAN
58 PsiBlast_CBE 83.6476%-127 - C3 -4I22 7.7
31 PsiBlast_CBE 83.2977%-123 - C3 -4I24 6.1
57 PsiBlast_CBE 82.1877%-135 - C3 -4HJO 6.8
59 PsiBlast_CBE 81.5374%-126 - C3 -3RCD 9.1 ERBB2_HUMAN
60 PsiBlast_CBE 81.3174%-127 - C3 -3RCD 9.1 ERBB2_HUMAN
72 HHSearch 80.6479%-139 - C3 -3LZB 10.4 EGFR_HUMAN
73 HHSearch 79.1358%-136 - C3 -3KEX 4.7 ERBB3_HUMAN
82 HHSearch 66.5641%-125 - C3 -4FL3 6.2 KSYK_HUMAN
74 HHSearch 62.5136%-112 - C3 -3CBL 7.9
81 HHSearch 62.5041%-116 - C3 -1MQB 3.6 EPHA2_HUMAN
79 HHSearch 62.2540%-114 - C3 -1U59 8.7
80 HHSearch 61.9640%-120 - C3 -2OZO 5.9 ZAP70_HUMAN
84 HHSearch 59.4742%-126 * C3 *4FYO 6.7
93 HHSearch 58.3038%-118 - C3 -3ZBF 5.1
61 Fugue 57.5038%-119 - C3 -1BYG 7.4 CSK_HUMAN