@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01048_MTNN_S: (2014-09-19 )
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2EL_B_7(4F2P)
?
[Raw transfer]




TDI_A_5(1Y6Q)
MTNN_ECOLI
[Raw transfer]




4CT_B_6(3O4V)
MTNN_ECOLI
[Raw transfer]




TDI_B_6(1Y6Q)
MTNN_ECOLI
[Raw transfer]




TDI_A_3(4F2W)
?
[Raw transfer]




MTA_C_3(1Z5O)
MTNN_ECOLI
[Raw transfer]




MTH_D_4(1NC1)
MTNN_ECOLI
[Raw transfer]




2EL_A_3(4F2P)
?
[Raw transfer]




BIG_B_5(4F3C)
?
[Raw transfer]




MTM_C_3(1Y6R)
MTNN_ECOLI
[Raw transfer]




BIG_A_3(4F3C)
?
[Raw transfer]




MTM_D_4(1Y6R)
MTNN_ECOLI
[Raw transfer]




MTH_C_3(1NC1)
MTNN_ECOLI
[Raw transfer]




DF9_B_4(3DF9)
MTNN_ECO57
[Raw transfer]




FMC_C_3(1NC3)
MTNN_ECOLI
[Raw transfer]




FMC_D_4(1NC3)
MTNN_ECOLI
[Raw transfer]




DF9_A_3(3DF9)
MTNN_ECO57
[Raw transfer]




BIG_A_3(3DP9)
MTNN_VIBCH
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




GOL_A_4(3O4V)
MTNN_ECOLI
[Raw transfer]




ADE_B_13(4F1W)
?
[Raw transfer]




ADE_D_4(1Z5N)
MTNN_ECOLI
[Raw transfer]




SAH_A_4(4G89)
MTNN_KLEP7
[Raw transfer]




GOL_A_4(1Z5P)
MTNN_ECOLI
[Raw transfer]




ADE_F_6(1Z5N)
MTNN_ECOLI
[Raw transfer]




ADE_A_3(4G89)
MTNN_KLEP7
[Raw transfer]




ADE_A_3(4JOS)
?
[Raw transfer]




ADE_A_6(4JWT)
?
[Raw transfer]




ADE_B_2(3NM6)
MQMTN_HELPJ
[Raw transfer]




ADE_A_2(4L0M)
?
[Raw transfer]




ADE_D_4(1JYS)
MTNN_ECOLI
[Raw transfer]




ADE_C_3(1JYS)
MTNN_ECOLI
[Raw transfer]




SR1_C_3(1Z5N)
MTNN_ECOLI
[Raw transfer]




TRS_B_3(3NM6)
MQMTN_HELPJ
[Raw transfer]




PGE_B_15(4F1W)
?
[Raw transfer]




EDO_B_6(4F3C)
?
[Raw transfer]




PG4_A_5(4F1W)
?
[Raw transfer]




IPA_A_5(1Z5P)
MTNN_ECOLI
[Raw transfer]




PGE_A_3(4F1W)
?
[Raw transfer]




EDO_A_3(4KN5)
?
[Raw transfer]




PE5_A_3(1Z5P)
MTNN_ECOLI
[Raw transfer]




7 PsiBlast_PDB 96.18100%-141 - C2 -1Z5P 2.7 MTNN_ECOLI
9 PsiBlast_PDB 94.5699%-130 - C2 -1Z5N 4.1 MTNN_ECOLI
23 PsiBlast_CBE 94.30100%-126 - C2 -1Y6Q 6.3 MTNN_ECOLI
20 PsiBlast_CBE 94.30100%-127 - C2 -3O4V 7.3 MTNN_ECOLI
27 PsiBlast_CBE 94.1699%-127 - C2 -1Z5N 4.0 MTNN_ECOLI
33 PsiBlast_CBE 94.1395%-127 - C2 -4F1W 4.2 ?
10 PsiBlast_PDB 94.0599%-127 - C2 -1Z5O 6.5 MTNN_ECOLI
4 PsiBlast_PDB 94.00100%-127 - C2 -1NC1 5.8 MTNN_ECOLI
47 HHSearch 93.8596%-137 - C2 -4F1W 1.8 ?
5 PsiBlast_PDB 93.73100%-128 - C2 -1Y6Q 6.4 MTNN_ECOLI
3 PsiBlast_PDB 93.71100%-128 - C2 -1NC3 6.1 MTNN_ECOLI
22 PsiBlast_CBE 93.40100%-127 - C2 -1Y6R 6.2 MTNN_ECOLI
6 PsiBlast_PDB 93.37100%-125 - C2 -1Y6R 6.4 MTNN_ECOLI
21 PsiBlast_CBE 93.28100%-128 - C2 -3DF9 6.9 MTNN_ECO57
2 PsiBlast_PDB 93.25100%-140 - C2 -1JYS 3.6 MTNN_ECOLI
30 PsiBlast_CBE 93.2295%-129 - C2 -4F3C 6.6 ?
26 PsiBlast_CBE 93.12100%-139 - C2 -1JYS 3.8 MTNN_ECOLI
32 PsiBlast_CBE 93.0495%-127 - C2 -4F2P 6.6 ?
25 PsiBlast_CBE 93.04100%-124 - C2 -1NC1 6.3 MTNN_ECOLI
28 PsiBlast_CBE 92.9099%-127 - C2 -1Z5O - MTNN_ECOLI
8 PsiBlast_PDB 92.82100%-127 - C2 -3DF9 7.0 MTNN_ECO57
24 PsiBlast_CBE 92.67100%-125 - C2 -1NC3 6.1 MTNN_ECOLI
12 PsiBlast_PDB 92.6595%-127 - C2 -4F2P 6.4 ?
1 PsiBlast_PDB 92.45100%-125 - C2 -3O4V 3.0 MTNN_ECOLI
13 PsiBlast_PDB 92.4395%-126 - C2 -4F2W 6.6 ?
14 PsiBlast_PDB 92.2095%-127 - C2 -4F3C 6.9 ?
31 PsiBlast_CBE 91.9995%-127 - C2 -4F2W - ?
16 PsiBlast_PDB 91.7190%-130 - C2 -4G89 4.1 MTNN_KLEP7
46 HHSearch 78.0160%-121 - C2 -3DP9 6.8 MTNN_VIBCH
44 HHSearch 75.5855%-121 - C2 -3BL6 6.1 MTNN_STAAM
45 HHSearch 74.2948%-119 * C2 *3EEI 6.1 ?
51 HHSearch 72.5341%-121 - C2 -4KN5 3.2 ?
54 HHSearch 71.7039%-116 - C2 -4L0M 3.8 ?
53 HHSearch 68.1337%-115 - C2 -4JOS 4.2 ?
52 HHSearch 67.6236%-118 - C2 -4JWT 4.0 ?
50 HHSearch 64.2135%-112 - C2 -3NM6 4.0 MQMTN_HELPJ