@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01180_PYRD_H: (2014-09-21 )
MGHHHHHHHHHHSSGHIDDDDKHMLEMATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_H_8(2FPY)
PYRD_HUMAN
[Raw transfer]




ILH_A_9(2FQI)
PYRD_HUMAN
[Raw transfer]




ILB_A_9(2FPT)
PYRD_HUMAN
[Raw transfer]




7Z5_A_7(3KVL)
PYRD_HUMAN
[Raw transfer]




1X5_A_7(3KVJ)
PYRD_HUMAN
[Raw transfer]




AFI_A_5(1UUM)
PYRD_RAT
[Raw transfer]




VGN_A_4(2WV8)
PYRD_HUMAN
[Raw transfer]




AFI_B_9(1UUM)
PYRD_RAT
[Raw transfer]




6X1_A_6(3KVK)
PYRD_HUMAN
[Raw transfer]




R2C_A_7(2PRL)
PYRD_HUMAN
[Raw transfer]




201_B_2(2B0M)
PYRD_HUMAN
[Raw transfer]




ILC_A_10(2FPV)
PYRD_HUMAN
[Raw transfer]




BRE_A_4(1D3G)
PYRD_HUMAN
[Raw transfer]




BRF_A_2(1UUO)
PYRD_RAT
[Raw transfer]




951_A_7(3KVM)
PYRD_HUMAN
[Raw transfer]




ILF_J_10(2FPY)
PYRD_HUMAN
[Raw transfer]




238_A_4(2PRH)
PYRD_HUMAN
[Raw transfer]




3FT_A_6(2BXV)
PYRD_HUMAN
[Raw transfer]




MD7_A_4(3G0X)
PYRD_HUMAN
[Raw transfer]




KFZ_A_6(3ZWT)
PYRD_HUMAN
[Raw transfer]




AVQ_A_7(3ZWS)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(3U2O)
PYRD_HUMAN
[Raw transfer]




CJH_A_7(3FJL)
PYRD_HUMAN
[Raw transfer]




BCE_A_4(3F1Q)
PYRD_HUMAN
[Raw transfer]




03U_A_4(3U2O)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3KVM)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(2PRH)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(1UUO)
PYRD_RAT
[Raw transfer]




FMN_A_2(2PRM)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3G0U)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(3FJL)
PYRD_HUMAN
[Raw transfer]




FMN_C_3(2B0M)
PYRD_HUMAN
[Raw transfer]




FMN_A_4(2BXV)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(3ZWS)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3KVL)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3KVJ)
PYRD_HUMAN
[Raw transfer]




FMN_A_4(1TV5)
PYRD_PLAF7
[Raw transfer]




FMN_A_2(3G0X)
PYRD_HUMAN
[Raw transfer]




FMN_A_7(2FQI)
PYRD_HUMAN
[Raw transfer]




FMN_A_7(2FPT)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(3F1Q)
PYRD_HUMAN
[Raw transfer]




FMN_A_5(1D3H)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3KVK)
PYRD_HUMAN
[Raw transfer]




FMN_A_8(2FPV)
PYRD_HUMAN
[Raw transfer]




FMN_A_5(1D3G)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(3FJ6)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(3ZWT)
PYRD_HUMAN
[Raw transfer]




FMN_A_5(2PRL)
PYRD_HUMAN
[Raw transfer]




FMN_A_2(2WV8)
PYRD_HUMAN
[Raw transfer]




MDY_A_4(3G0U)
PYRD_HUMAN
[Raw transfer]




FMN_A_3(1UUM)
PYRD_RAT
[Raw transfer]




FMN_B_7(1UUM)
PYRD_RAT
[Raw transfer]




FMN_A_3(3I65)
PYRD_PLAF7
[Raw transfer]




CIH_A_7(3FJ6)
PYRD_HUMAN
[Raw transfer]




A26_A_4(1D3H)
PYRD_HUMAN
[Raw transfer]




ORO_A_2(3FJ6)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3ZWS)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3FJL)
PYRD_HUMAN
[Raw transfer]




ORO_I_9(2FPY)
PYRD_HUMAN
[Raw transfer]




ORO_A_6(1D3G)
PYRD_HUMAN
[Raw transfer]




ORO_A_6(1D3H)
PYRD_HUMAN
[Raw transfer]




ORO_A_2(3G0U)
PYRD_HUMAN
[Raw transfer]




ORO_A_8(2FPT)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3G0X)
PYRD_HUMAN
[Raw transfer]




ORO_A_9(2FPV)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(2WV8)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3U2O)
PYRD_HUMAN
[Raw transfer]




ORO_A_5(2BXV)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3ZWT)
PYRD_HUMAN
[Raw transfer]




ORO_A_6(2PRL)
PYRD_HUMAN
[Raw transfer]




ORO_D_4(2B0M)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(2PRM)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(3F1Q)
PYRD_HUMAN
[Raw transfer]




DOR_A_4(3KVM)
PYRD_HUMAN
[Raw transfer]




ORO_A_3(2PRH)
PYRD_HUMAN
[Raw transfer]




ORO_A_8(2FQI)
PYRD_HUMAN
[Raw transfer]




DOR_A_4(3KVK)
PYRD_HUMAN
[Raw transfer]




DOR_A_4(3KVJ)
PYRD_HUMAN
[Raw transfer]




DOR_A_4(3KVL)
PYRD_HUMAN
[Raw transfer]




ORO_A_4(1UUO)
PYRD_RAT
[Raw transfer]




ORO_A_4(1UUM)
PYRD_RAT
[Raw transfer]




ORO_B_8(1UUM)
PYRD_RAT
[Raw transfer]




ORO_A_4(3I65)
PYRD_PLAF7
[Raw transfer]




ORO_A_5(1TV5)
PYRD_PLAF7
[Raw transfer]




DDQ_A_7(1D3G)
PYRD_HUMAN
[Raw transfer]




DDQ_A_8(2PRL)
PYRD_HUMAN
[Raw transfer]




DDQ_A_5(2PRH)
PYRD_HUMAN
[Raw transfer]




DDQ_A_5(2WV8)
PYRD_HUMAN
[Raw transfer]




20 PsiBlast_CBE 98.39100% -83 - C4 -2PRH 10.9 PYRD_HUMAN
19 PsiBlast_CBE 96.73100% -77 - C4 -2PRL 11.0 PYRD_HUMAN
7 PsiBlast_PDB 96.3799% -78 - C4 -3KVK 10.8 PYRD_HUMAN
23 PsiBlast_CBE 96.28100% -80 - C4 -1D3G 11.1 PYRD_HUMAN
9 PsiBlast_PDB 96.1599% -75 - C4 -3KVM 10.9 PYRD_HUMAN
6 PsiBlast_PDB 96.0599% -77 - C4 -3KVJ 11.0 PYRD_HUMAN
22 PsiBlast_CBE 96.01100% -77 - C4 -1D3H 10.8 PYRD_HUMAN
16 PsiBlast_CBE 96.00100% -77 - C4 -3FJ6 10.8 PYRD_HUMAN
2 PsiBlast_PDB 95.9199% -76 - C4 -2FPT 10.5 PYRD_HUMAN
21 PsiBlast_CBE 95.74100% -77 - C4 -2BXV 10.6 PYRD_HUMAN
13 PsiBlast_CBE 95.71100% -80 - C4 -3G0X 10.9 PYRD_HUMAN
5 PsiBlast_PDB 95.7199% -78 - C4 -2FQI 10.7 PYRD_HUMAN
17 PsiBlast_CBE 95.61100% -76 - C4 -3F1Q 10.9 PYRD_HUMAN
3 PsiBlast_PDB 95.6199% -76 - C4 -2FPV 10.5 PYRD_HUMAN
24 PsiBlast_CBE 95.59100% -73 - C4 -2WV8 9.9 PYRD_HUMAN
4 PsiBlast_PDB 95.5799% -76 - C4 -2FPY 10.7 PYRD_HUMAN
10 PsiBlast_CBE 95.47100% -75 - C4 -3U2O 10.7 PYRD_HUMAN
14 PsiBlast_CBE 95.29100% -75 - C4 -3G0U 10.7 PYRD_HUMAN
8 PsiBlast_PDB 95.2399% -77 - C4 -3KVL 11.0 PYRD_HUMAN
18 PsiBlast_CBE 95.18100% -70 - C4 -2PRM 9.8 PYRD_HUMAN
1 PsiBlast_PDB 95.18100% -74 - C4 -2B0M 10.0 PYRD_HUMAN
27 PsiBlast_CBE 94.9489% -82 - C4 -1UUM 9.7 PYRD_RAT
15 PsiBlast_CBE 94.87100% -75 - C4 -3FJL 11.0 PYRD_HUMAN
26 PsiBlast_CBE 94.6189% -82 - C4 -1UUM 9.8 PYRD_RAT
11 PsiBlast_CBE 94.20100% -78 - C4 -3ZWT 10.9 PYRD_HUMAN
12 PsiBlast_CBE 93.92100% -76 - C4 -3ZWS 10.8 PYRD_HUMAN
25 PsiBlast_CBE 93.3589% -83 - C4 -1UUO 9.8 PYRD_RAT
37 HHSearch 80.4639% -72 - C4 -3I65 7.7 PYRD_PLAF7
38 HHSearch 78.2739% -60 * C4 *1TV5 6.9 PYRD_PLAF7