@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF_ST: (2014-09-22 )
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_A_3(2OS3)
DEF_STRP1
[Raw transfer]




BB2_A_6(2OS1)
DEF_ENTFA
[Raw transfer]




SB8_A_4(2AIA)
DEF_STRR6
[Raw transfer]




SB7_A_4(2AI7)
DEF_STRR6
[Raw transfer]




BB2_A_5(2OKL)
DEF2_BACCR
[Raw transfer]




SB9_P_4(2AIE)
DEF_STRR6
[Raw transfer]




BB2_A_5(3UWB)
?
[Raw transfer]




NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




BRR_A_5(1RL4)
?
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]




FMT_A_7(4DR8)
?
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




CHAIN_F_3(3G6N)
?
[Raw transfer]

-

10 PsiBlast_PDB 82.3152% -90 - C2 -2OS3 5.9 DEF_STRP1
7 PsiBlast_PDB 80.7453%-100 - C2 -2OS1 6.0 DEF_ENTFA
23 HHSearch 80.7159% -88 - C2 -2OKL 6.2 DEF2_BACCR
6 PsiBlast_PDB 79.8354%-103 - C2 -3G6N 2.8 ?
11 PsiBlast_PDB 78.7350% -95 - C2 -2AIE 4.4 DEF_STRR6
9 PsiBlast_PDB 78.0550% -94 - C2 -2AIA 5.1 DEF_STRR6
8 PsiBlast_PDB 77.4150% -92 - C2 -2AI7 4.3 DEF_STRR6
37 HHSearch 58.7632% -80 - C2 -4DR8 3.3 ?
31 HHSearch 57.4534% -73 - C2 -1Y6H 3.4 DEF_LEPIN
33 HHSearch 53.9933% -79 - C2 -1RL4 4.1 ?
29 HHSearch 53.9740% -64 - C2 -3UWB 6.1 ?
43 HHSearch 53.4331% -76 * C2 *2W3T 2.4 DEF_ECOLI
40 HHSearch 53.1330% -76 - C2 -1N5N 2.6 DEF_PSEAE
32 HHSearch 53.0831% -71 - C2 -1XEO 3.6 DEF_ECOLI