@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF_ST: (2014-09-22 )
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SB8_A_4(2AIA)
DEF_STRR6
[Raw transfer]




5LI_P_4(3SW8)
?
[Raw transfer]




SB7_A_4(2AI7)
DEF_STRR6
[Raw transfer]




BB2_A_3(2OS3)
DEF_STRP1
[Raw transfer]




SB9_P_4(2AIE)
DEF_STRR6
[Raw transfer]




BB2_A_6(2OS1)
DEF_ENTFA
[Raw transfer]




BB2_A_5(3UWB)
?
[Raw transfer]




NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]




BB2_A_5(2OKL)
DEF2_BACCR
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




BRR_A_5(1RL4)
?
[Raw transfer]




FMT_A_7(4DR8)
?
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




CHAIN_F_3(3G6N)
?
[Raw transfer]

-

12 PsiBlast_CBE 98.89100%-113 - C2 -3SW8 5.2 ?
3 PsiBlast_PDB 98.7598%-113 - C2 -2AIE 3.8 DEF_STRR6
1 PsiBlast_PDB 98.5598%-111 - C2 -2AI7 4.1 DEF_STRR6
2 PsiBlast_PDB 97.5198%-112 - C2 -2AIA 5.9 DEF_STRR6
4 PsiBlast_PDB 90.5674%-104 - C2 -2OS3 5.8 DEF_STRP1
5 PsiBlast_PDB 84.3368%-108 - C2 -3G6N 2.8 ?
7 PsiBlast_PDB 83.6268%-108 - C2 -2OS1 6.4 DEF_ENTFA
26 HHSearch 71.3853% -86 - C2 -2OKL 6.0 DEF2_BACCR
31 HHSearch 55.0035% -66 - C2 -1Y6H 3.4 DEF_LEPIN
30 HHSearch 54.5439% -61 - C2 -3UWB 6.2 ?
34 HHSearch 53.0638% -76 - C2 -1RL4 4.1 ?
37 HHSearch 52.5132% -70 - C2 -4DR8 3.3 ?