@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01471_MMP10_: (2014-09-24 )
MMHLAFLVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKYYNLEKDVKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGMPKWRKTHLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMISFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTEDASGTNLFLVAAHELGHSLGLFHSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGSEMPAKCDPALSFDAISTLRGEYLFFKDRYFWRRSHWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGVEPKVDAVLQAFGFFYFFSGSSQFEFDPNARMVTHILKSNSWLHC

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

Z79_A_7(3OHO)
MMP3_HUMAN
[Raw transfer]



0XX_A_9(4H1Q)
MMP9_HUMAN
[Raw transfer]



IN7_A_8(1B8Y)
MMP3_HUMAN
[Raw transfer]



NGH_A_20(1Q3A)
MMP10_HUMAN
[Raw transfer]



SPI_B_13(1D8F)
MMP3_HUMAN
[Raw transfer]



OHL_A_7(3OHL)
MMP3_HUMAN
[Raw transfer]



SPC_A_13(1D7X)
MMP3_HUMAN
[Raw transfer]



N25_B_13(1BQO)
MMP3_HUMAN
[Raw transfer]



NGH_B_13(4G9L)
MMP3_HUMAN
[Raw transfer]



BBH_B_13(1D8M)
MMP3_HUMAN
[Raw transfer]



111_B_13(1G49)
MMP3_HUMAN
[Raw transfer]



MM3_A_13(1D5J)
MMP3_HUMAN
[Raw transfer]



NGH_B_15(4JA1)
MMP3_HUMAN
[Raw transfer]



NGH_B_21(4DPE)
MMP3_HUMAN
[Raw transfer]



FA4_A_13(2D1O)
MMP3_HUMAN
[Raw transfer]



BBH_B_13(1G05)
MMP3_HUMAN
[Raw transfer]



MM3_B_14(1D5J)
MMP3_HUMAN
[Raw transfer]



S27_B_13(1B3D)
MMP3_HUMAN
[Raw transfer]



BSI_A_6(1I76)
MMP8_HUMAN
[Raw transfer]



HTA_A_8(1FBL)
MMP1_PIG
[Raw transfer]



MBS_B_13(1HY7)
MMP3_HUMAN
[Raw transfer]



S80_B_13(1BIW)
MMP3_HUMAN
[Raw transfer]



BAT_A_6(1RM8)
MMP16_HUMAN
[Raw transfer]



L04_A_7(1HFS)
MMP3_HUMAN
[Raw transfer]



GOL_B_22(1G4K)
MMP3_HUMAN
[Raw transfer]



TR1_B_13(1C3I)
MMP3_HUMAN
[Raw transfer]



TR1_A_13(1C8T)
MMP3_HUMAN
[Raw transfer]



IN8_A_8(2USN)
MMP3_HUMAN
[Raw transfer]



FA4_A_13(2D1O)
MMP3_HUMAN
[Raw transfer]



CHAIN_B_2(4IN9)
?
[Raw transfer]
-
NGH_C_21(1Q3A)
MMP10_HUMAN
[Raw transfer]



CHAIN_B_2(3AYU)
MMP2_HUMAN
[Raw transfer]
-
CHAIN_C_3(4FVL)
?
[Raw transfer]
-
CHAIN_C_3(4FVL)
?
[Raw transfer]
-
CHAIN_W_5(4G0D)
MMP13_HUMAN
[Raw transfer]
-
7 PsiBlast_PDB 85.3651%-104 - C2 -4G0D 5.5 MMP13_HUMAN
81 HHSearch 85.1052%-103 - C2 -4FVL 12.4 ?
2 PsiBlast_PDB 81.6953%-101 - C2 -1FBL 5.8 MMP1_PIG
46 PsiBlast_CBE 56.1185%-104 - C2 -2D1O 8.1 MMP3_HUMAN
30 PsiBlast_CBE 56.0284%-101 - C2 -1HY7 7.0 MMP3_HUMAN
54 PsiBlast_CBE 55.4185%-104 - C2 -1B8Y 5.7 MMP3_HUMAN
23 PsiBlast_CBE 55.0099%-101 - C2 -1Q3A 2.8 MMP10_HUMAN
57 PsiBlast_CBE 54.9085%-107 - C2 -2USN 4.3 MMP3_HUMAN
47 PsiBlast_CBE 54.8985%-106 - C2 -3OHO 4.1 MMP3_HUMAN
36 PsiBlast_CBE 54.8084%-103 - C2 -1D8M 5.4 MMP3_HUMAN
39 PsiBlast_CBE 54.7884% -98 - C2 -1D5J 5.4 MMP3_HUMAN
44 PsiBlast_CBE 54.7484%-100 - C2 -1B3D 5.5 MMP3_HUMAN
42 PsiBlast_CBE 54.7184% -99 - C2 -1BQO 5.8 MMP3_HUMAN
18 PsiBlast_PDB 54.6184% -98 - C2 -1D7X 5.2 MMP3_HUMAN
41 PsiBlast_CBE 54.5984% -95 - C2 -1C3I 9.4 MMP3_HUMAN
38 PsiBlast_CBE 54.5784% -97 - C2 -1D7X - MMP3_HUMAN
37 PsiBlast_CBE 54.5684% -97 - C2 -1D8F 5.4 MMP3_HUMAN
49 PsiBlast_CBE 54.5085%-100 - C2 -1G4K 2.3 MMP3_HUMAN
45 PsiBlast_CBE 54.4885%-101 - C2 -2D1O 1.2 MMP3_HUMAN
32 PsiBlast_CBE 54.4384% -99 - C2 -1G49 5.7 MMP3_HUMAN
34 PsiBlast_CBE 54.0184% -97 - C2 -1G05 5.3 MMP3_HUMAN
53 PsiBlast_CBE 53.8185%-103 - C2 -3OHL 5.4 MMP3_HUMAN
20 PsiBlast_PDB 53.8184% -96 - C2 -1D5J 5.4 MMP3_HUMAN
26 PsiBlast_CBE 53.6984% -99 - C2 -4G9L 4.8 MMP3_HUMAN
11 PsiBlast_PDB 53.6099% -99 - C2 -1Q3A 4.6 MMP10_HUMAN
22 PsiBlast_CBE 53.5899%-103 - C2 -1Q3A - MMP10_HUMAN
43 PsiBlast_CBE 53.5484% -99 - C2 -1BIW 6.5 MMP3_HUMAN
56 PsiBlast_CBE 53.4286%-102 - C2 -1C8T 8.5 MMP3_HUMAN
24 PsiBlast_CBE 52.8684% -94 - C2 -4JA1 4.7 MMP3_HUMAN
55 PsiBlast_CBE 52.7886% -95 - C2 -1C8T - MMP3_HUMAN
28 PsiBlast_CBE 52.6684% -93 - C2 -4DPE 4.8 MMP3_HUMAN
68 PsiBlast_CBE 51.4786%-100 - C2 -1HFS 10.3 MMP3_HUMAN
101 HHSearch 45.9058% -95 * C2 *3AYU 5.7 MMP2_HUMAN
95 HHSearch 43.8154% -91 - C2 -1I76 7.3 MMP8_HUMAN
98 HHSearch 42.4157% -92 - C2 -4H1Q 8.6 MMP9_HUMAN
99 HHSearch 41.2151% -86 - C2 -1RM8 6.1 MMP16_HUMAN
104 HHSearch 37.1343% -88 - C2 -4IN9 5.8 ?