@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01471_MMP12_: (2014-09-24 )
MKFLLILLLQATASGALPLNSSTSLEKNNVLFGERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCGVPDVHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRLPNPDNSEPALCDPNLSFDAVTTVGNKIFFFKDRFFWLKVSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLLQRITKTLKSNSWFGC

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMD_B_(3UVC)
MMP12_HUMAN
[Raw transfer]




D3X_A_7(3N2U)
MMP12_HUMAN
[Raw transfer]




Z79_A_7(3LK8)
MMP12_HUMAN
[Raw transfer]




HS4_A_7(3F17)
MMP12_HUMAN
[Raw transfer]




HS1_A_7(3F15)
MMP12_HUMAN
[Raw transfer]




JT5_A_7(3N2V)
MMP12_HUMAN
[Raw transfer]




CGS_B_20(2W0D)
MMP12_HUMAN
[Raw transfer]




HS3_A_7(3F16)
MMP12_HUMAN
[Raw transfer]




KLH_A_7(3RTT)
MMP12_HUMAN
[Raw transfer]




10B_A_7(4H76)
MMP12_HUMAN
[Raw transfer]




0XX_A_9(4H1Q)
MMP9_HUMAN
[Raw transfer]




HS7_A_7(3F1A)
MMP12_HUMAN
[Raw transfer]




TBL_A_7(3EHY)
MMP12_HUMAN
[Raw transfer]




023_D_22(2WO8)
MMP12_HUMAN
[Raw transfer]




023_B_14(2WOA)
MMP12_HUMAN
[Raw transfer]




KLJ_A_7(4GUY)
MMP12_HUMAN
[Raw transfer]




023_B_12(2WO9)
MMP12_HUMAN
[Raw transfer]




E37_A_7(4EFS)
MMP12_HUMAN
[Raw transfer]




HS5_A_7(3F18)
MMP12_HUMAN
[Raw transfer]




L29_B_14(4H49)
MMP12_HUMAN
[Raw transfer]




023_B_11(2WO8)
MMP12_HUMAN
[Raw transfer]




KLG_A_7(3RTS)
MMP12_HUMAN
[Raw transfer]




NHK_A_7(3NX7)
MMP12_HUMAN
[Raw transfer]




576_A_10(2WOA)
MMP12_HUMAN
[Raw transfer]




CGS_B_14(1JIZ)
MMP12_HUMAN
[Raw transfer]




077_C_20(2WO8)
MMP12_HUMAN
[Raw transfer]




BDL_A_7(3EHX)
MMP12_HUMAN
[Raw transfer]




068_A_8(2WO9)
MMP12_HUMAN
[Raw transfer]




CGS_A_14(2W0D)
MMP12_HUMAN
[Raw transfer]




576_C_25(2WOA)
MMP12_HUMAN
[Raw transfer]




0D2_A_16(3UVC)
MMP12_HUMAN
[Raw transfer]




068_C_24(2WO9)
MMP12_HUMAN
[Raw transfer]




BSI_A_6(1I76)
MMP8_HUMAN
[Raw transfer]




CGS_A_13(1JIZ)
MMP12_HUMAN
[Raw transfer]




HS6_A_7(3F19)
MMP12_HUMAN
[Raw transfer]




L29_B_14(4H49)
MMP12_HUMAN
[Raw transfer]




Y38_A_8(4H84)
MMP12_HUMAN
[Raw transfer]




R4B_A_7(4GR0)
MMP12_HUMAN
[Raw transfer]




GOL_B_21(4H49)
MMP12_HUMAN
[Raw transfer]




GOL_B_20(4H30)
MMP12_HUMAN
[Raw transfer]




R45_A_7(4GR3)
MMP12_HUMAN
[Raw transfer]




0ZD_B_19(4H30)
MMP12_HUMAN
[Raw transfer]




DEO_B_14(1ROS)
MMP12_HUMAN
[Raw transfer]




HTA_A_8(1FBL)
MMP1_PIG
[Raw transfer]




DEO_A_13(1ROS)
MMP12_HUMAN
[Raw transfer]




GOL_A_12(4H84)
MMP12_HUMAN
[Raw transfer]




GOL_A_10(4H30)
MMP12_HUMAN
[Raw transfer]




BAT_A_7(1JK3)
MMP12_HUMAN
[Raw transfer]




GOL_A_8(4EFS)
MMP12_HUMAN
[Raw transfer]




QEG_A_7(3TSK)
MMP12_HUMAN
[Raw transfer]




0ZD_B_19(4H30)
MMP12_HUMAN
[Raw transfer]




CP8_A_3(1UTT)
MMP12_HUMAN
[Raw transfer]




BAT_A_6(1RM8)
MMP16_HUMAN
[Raw transfer]




M4S_A_8(3LKA)
MMP12_HUMAN
[Raw transfer]




PF3_A_3(1UTZ)
MMP12_HUMAN
[Raw transfer]




HAE_A_7(3LKA)
MMP12_HUMAN
[Raw transfer]




HAE_A_2(1UTT)
MMP12_HUMAN
[Raw transfer]




HAE_A_5(1UTZ)
MMP12_HUMAN
[Raw transfer]




HAE_B_11(1UTZ)
MMP12_HUMAN
[Raw transfer]




EDO_A_17(3UVC)
MMP12_HUMAN
[Raw transfer]




PGO_A_11(4EFS)
MMP12_HUMAN
[Raw transfer]




PGR_A_10(4H84)
MMP12_HUMAN
[Raw transfer]




IMD_A_13(4EFS)
MMP12_HUMAN
[Raw transfer]




IMD_B_(3UVC)
MMP12_HUMAN
[Raw transfer]




PGR_A_10(4EFS)
MMP12_HUMAN
[Raw transfer]




PEG_A_11(4H76)
MMP12_HUMAN
[Raw transfer]




PEG_A_14(4H84)
MMP12_HUMAN
[Raw transfer]




PEG_B_20(4H49)
MMP12_HUMAN
[Raw transfer]




PEG_B_22(4H30)
MMP12_HUMAN
[Raw transfer]




0D2_A_16(3UVC)
MMP12_HUMAN
[Raw transfer]




Y38_A_8(4H84)
MMP12_HUMAN
[Raw transfer]




PF3_A_3(1UTZ)
MMP12_HUMAN
[Raw transfer]




PGO_B_(4H84)
MMP12_HUMAN
[Raw transfer]




PF3_B_10(1UTZ)
MMP12_HUMAN
[Raw transfer]




CHAIN_B_2(4IN9)
?
[Raw transfer]

-

PGO_A_10(4H76)
MMP12_HUMAN
[Raw transfer]




PEG_A_14(4H84)
MMP12_HUMAN
[Raw transfer]




CGS_A_14(2W0D)
MMP12_HUMAN
[Raw transfer]




PEG_B_22(4H30)
MMP12_HUMAN
[Raw transfer]




CHAIN_C_3(4FVL)
?
[Raw transfer]

-

CHAIN_B_2(3AYU)
MMP2_HUMAN
[Raw transfer]

-

CHAIN_W_5(4G0D)
MMP13_HUMAN
[Raw transfer]

-

PGO_B_(4H84)
MMP12_HUMAN
[Raw transfer]




3 PsiBlast_PDB 80.8853%-106 - C3 -1FBL 5.1 MMP1_PIG
8 PsiBlast_PDB 79.5949%-103 - C3 -4G0D 8.0 MMP13_HUMAN
7 PsiBlast_PDB 77.9049%-103 - C3 -4FVL 9.3 ?
21 PsiBlast_CBE 59.75100% -99 - C3 -1JIZ 5.6 MMP12_HUMAN
27 PsiBlast_CBE 59.62100%-101 - C3 -2WO9 8.1 MMP12_HUMAN
31 PsiBlast_CBE 59.60100%-103 - C3 -2WO8 8.2 MMP12_HUMAN
73 PsiBlast_CBE 59.4399%-107 - C3 -4GR3 8.8 MMP12_HUMAN
30 PsiBlast_CBE 59.43100%-105 - C3 -2WO8 7.0 MMP12_HUMAN
9 PsiBlast_PDB 59.35100%-101 - C3 -1JIZ 5.3 MMP12_HUMAN
12 PsiBlast_PDB 59.32100%-101 - C3 -2WO9 7.8 MMP12_HUMAN
24 PsiBlast_CBE 59.30100%-102 - C3 -2WOA 7.4 MMP12_HUMAN
25 PsiBlast_CBE 59.28100%-102 - C3 -2WOA 8.0 MMP12_HUMAN
13 PsiBlast_PDB 59.27100%-104 - C3 -2WOA 7.2 MMP12_HUMAN
20 PsiBlast_PDB 59.1999%-106 - C3 -1JK3 6.5 MMP12_HUMAN
60 PsiBlast_CBE 59.1299%-106 - C3 -3F16 4.7 MMP12_HUMAN
75 PsiBlast_CBE 59.1199%-104 - C3 -4EFS 8.8 MMP12_HUMAN
43 PsiBlast_CBE 59.0899%-108 - C3 -3UVC 2.8 MMP12_HUMAN
45 PsiBlast_CBE 59.0699%-106 - C3 -2W0D 2.8 MMP12_HUMAN
56 PsiBlast_CBE 59.0599%-107 - C3 -3F1A 3.9 MMP12_HUMAN
46 PsiBlast_CBE 59.0599%-105 - C3 -2W0D 5.8 MMP12_HUMAN
17 PsiBlast_PDB 59.05100%-105 - C3 -1UTZ 9.6 MMP12_HUMAN
28 PsiBlast_CBE 59.03100%-103 - C3 -2WO9 7.9 MMP12_HUMAN
59 PsiBlast_CBE 59.0299%-106 - C3 -3F17 6.9 MMP12_HUMAN
62 PsiBlast_CBE 59.0199%-107 - C3 -3EHY 4.2 MMP12_HUMAN
53 PsiBlast_CBE 59.0199%-106 - C3 -3N2U 5.1 MMP12_HUMAN
51 PsiBlast_CBE 59.0199%-104 - C3 -3NX7 4.8 MMP12_HUMAN
19 PsiBlast_PDB 58.9799%-104 - C3 -3UVC 5.6 MMP12_HUMAN
16 PsiBlast_PDB 58.96100%-104 - C3 -1UTT 8.1 MMP12_HUMAN
74 PsiBlast_CBE 58.9599%-106 - C3 -4GR0 11.7 MMP12_HUMAN
61 PsiBlast_CBE 58.9199%-105 - C3 -3F15 4.6 MMP12_HUMAN
64 PsiBlast_CBE 58.8999%-108 - C3 -4H84 3.4 MMP12_HUMAN
57 PsiBlast_CBE 58.8999%-105 - C3 -3F19 4.1 MMP12_HUMAN
10 PsiBlast_PDB 58.89100%-104 - C3 -1ROS 9.7 MMP12_HUMAN
70 PsiBlast_CBE 58.8799%-104 - C3 -4H49 7.9 MMP12_HUMAN
55 PsiBlast_CBE 58.8799%-106 - C3 -3LK8 4.4 MMP12_HUMAN
54 PsiBlast_CBE 58.8299%-106 - C3 -3LKA 4.3 MMP12_HUMAN
52 PsiBlast_CBE 58.8099%-108 - C3 -3N2V 6.6 MMP12_HUMAN
63 PsiBlast_CBE 58.7499%-104 - C3 -3EHX 6.2 MMP12_HUMAN
71 PsiBlast_CBE 58.7399%-103 - C3 -4H30 7.7 MMP12_HUMAN
76 PsiBlast_CBE 58.7299%-106 - C3 -3TSK 10.1 MMP12_HUMAN
42 PsiBlast_CBE 58.73100%-103 - C3 -1UTZ 4.6 MMP12_HUMAN
69 PsiBlast_CBE 58.7299%-106 - C3 -4H49 7.5 MMP12_HUMAN
18 PsiBlast_PDB 58.7199%-104 - C3 -2W0D 5.5 MMP12_HUMAN
66 PsiBlast_CBE 58.6899%-107 - C3 -4H76 7.4 MMP12_HUMAN
58 PsiBlast_CBE 58.6699%-106 - C3 -3F18 3.8 MMP12_HUMAN
72 PsiBlast_CBE 58.6499%-106 - C3 -4H30 7.1 MMP12_HUMAN
22 PsiBlast_CBE 58.61100%-104 - C3 -1ROS 9.3 MMP12_HUMAN
65 PsiBlast_CBE 58.5899%-103 - C3 -4H84 7.9 MMP12_HUMAN
29 PsiBlast_CBE 58.58100%-102 - C3 -2WO8 8.1 MMP12_HUMAN
49 PsiBlast_CBE 58.4099%-102 - C3 -3RTT 5.5 MMP12_HUMAN
50 PsiBlast_CBE 58.3899%-102 - C3 -3RTS 5.1 MMP12_HUMAN
48 PsiBlast_CBE 58.0099%-105 - C3 -4GUY 5.3 MMP12_HUMAN
109 HHSearch 53.6457% -92 - C3 -3AYU 9.7 MMP2_HUMAN
106 HHSearch 52.6853% -96 - C3 -1RM8 6.3 MMP16_HUMAN
103 HHSearch 52.0353% -91 - C3 -1I76 7.3 MMP8_HUMAN
105 HHSearch 51.3650% -88 * C3 *4H1Q 7.8 MMP9_HUMAN
112 HHSearch 47.3840% -82 - C3 -4IN9 6.1 ?