@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01487_AROD_E: (2014-09-25 )
MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3LB0)
AROD_SALTY
[Raw transfer]




DQA_B_4(3NNT)
AROD_SALTY
[Raw transfer]




QIC_B_4(4IUO)
AROD_SALTY
[Raw transfer]




QIC_A_3(4GUI)
AROD_SALTY
[Raw transfer]




DQA_A_3(3NNT)
AROD_SALTY
[Raw transfer]




QIC_A_3(4IUO)
AROD_SALTY
[Raw transfer]




SKM_A_3(4GUJ)
AROD_SALTY
[Raw transfer]




SKM_B_7(4GUJ)
AROD_SALTY
[Raw transfer]




QIC_B_6(4GUI)
AROD_SALTY
[Raw transfer]




3DS_A_4(4GUG)
AROD_SALTY
[Raw transfer]




DHS_F_6(1L9W)
AROD_SALTI
[Raw transfer]




DHS_E_5(1L9W)
AROD_SALTI
[Raw transfer]




DHS_H_8(1L9W)
AROD_SALTI
[Raw transfer]




DHS_G_7(1L9W)
AROD_SALTI
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




3DS_B_5(4GUG)
AROD_SALTY
[Raw transfer]




DHS_B_4(1QFE)
AROD_SALTI
[Raw transfer]




3DS_A_3(4GUH)
AROD_SALTY
[Raw transfer]




3DS_B_5(4GUH)
AROD_SALTY
[Raw transfer]




DHS_A_5(3JS3)
AROD_CLOD6
[Raw transfer]




FMT_A_4(3LB0)
AROD_SALTY
[Raw transfer]




GOL_A_5(2OX1)
AROD_ARCFU
[Raw transfer]




MLA_B_3(3S42)
AROD_SALTY
[Raw transfer]




DHK_A_3(2O7S)
DHQSD_ARATH
[Raw transfer]




SHL_A_7(4H3D)
AROD_CLOD6
[Raw transfer]




SHL_A_7(4H3D)
AROD_CLOD6
[Raw transfer]




SIN_B_9(4GFS)
AROD_SALTY
[Raw transfer]




EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]




PEG_A_6(4H3D)
AROD_CLOD6
[Raw transfer]




PEG_A_6(4H3D)
AROD_CLOD6
[Raw transfer]




43 Fugue 97.0676%-107 - C4 -1QFE 4.3 AROD_SALTI
20 PsiBlast_CBE 97.0480%-104 - C4 -3S42 2.8 AROD_SALTY
24 PsiBlast_CBE 96.6480%-109 - C4 -4GFS 3.6 AROD_SALTY
41 PsiBlast_CBE 96.3876%-103 - C4 -1L9W 3.9 AROD_SALTI
8 PsiBlast_PDB 96.2180%-103 - C4 -4GUJ 5.7 AROD_SALTY
39 PsiBlast_CBE 96.1776%-105 - C4 -1QFE 4.6 AROD_SALTI
22 PsiBlast_CBE 96.1280%-103 - C4 -4GUJ 3.7 AROD_SALTY
7 PsiBlast_PDB 96.0380%-104 - C4 -4GUI 5.2 AROD_SALTY
37 PsiBlast_CBE 95.7179%-102 - C4 -4IUO 5.1 AROD_SALTY
16 PsiBlast_PDB 95.7176%-102 - C4 -1L9W 4.6 AROD_SALTI
38 PsiBlast_CBE 95.5379%-104 - C4 -3NNT 5.3 AROD_SALTY
23 PsiBlast_CBE 95.5080%-102 - C4 -4GUI 3.8 AROD_SALTY
34 PsiBlast_CBE 95.4979%-113 - C4 -4GUG 4.6 AROD_SALTY
42 PsiBlast_CBE 95.4676%-105 - C4 -1L9W 4.1 AROD_SALTI
40 PsiBlast_CBE 95.4476%-102 - C4 -1L9W 4.1 AROD_SALTI
2 PsiBlast_PDB 94.8180%-100 - C4 -3LB0 4.1 AROD_SALTY
33 PsiBlast_CBE 94.8079%-102 - C4 -4GUH 4.8 AROD_SALTY
13 PsiBlast_PDB 94.6479%-103 - C4 -3NNT 5.3 AROD_SALTY
14 PsiBlast_PDB 94.6279%-103 - C4 -4IUO 4.7 AROD_SALTY
10 PsiBlast_PDB 94.3679%-106 - C4 -4GUG 2.9 AROD_SALTY
11 PsiBlast_PDB 93.9679%-104 - C4 -4GUH 4.7 AROD_SALTY
54 HHSearch 89.8554% -99 * C4 *4H3D 3.2 AROD_CLOD6
18 PsiBlast_PDB 87.8252% -96 - C4 -3JS3 4.5 AROD_CLOD6