@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01712_DNK_DR: (2014-09-27 )
MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVAR

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DCP_B_6(2VP4)
DNK_DROME
[Raw transfer]




DCP_C_7(2VP4)
DNK_DROME
[Raw transfer]




DCP_A_5(2VP4)
DNK_DROME
[Raw transfer]




DCP_D_8(2VP4)
DNK_DROME
[Raw transfer]




TTP_A_3(2JCS)
DNK_DROME
[Raw transfer]




TTP_B_6(2VP0)
DNK_DROME
[Raw transfer]




TTP_A_4(2VP0)
DNK_DROME
[Raw transfer]




TTP_A_6(1ZM7)
DNK_DROME
[Raw transfer]




DGT_A_3(2VP2)
DNK_DROME
[Raw transfer]




DGT_B_4(2VP2)
DNK_DROME
[Raw transfer]




GEO_A_3(2VPP)
DNK_DROME
[Raw transfer]




GEO_B_5(2VPP)
DNK_DROME
[Raw transfer]




DCZ_B_6(2VP5)
DNK_DROME
[Raw transfer]




DCZ_E_5(1J90)
DNK_DROME
[Raw transfer]




DCZ_A_5(2VP5)
DNK_DROME
[Raw transfer]




DCZ_F_6(1J90)
DNK_DROME
[Raw transfer]




AZZ_B_14(2JJ8)
DNK_DROME
[Raw transfer]




3L1_A_3(2ZI4)
DCK_HUMAN
[Raw transfer]




AR3_B_3(1P5Z)
DCK_HUMAN
[Raw transfer]




LLT_A_3(3HP1)
DCK_HUMAN
[Raw transfer]




BVD_D_12(2VQS)
DNK_DROME
[Raw transfer]




BVD_C_10(2VQS)
DNK_DROME
[Raw transfer]




DCZ_A_11(2A2Z)
DCK_HUMAN
[Raw transfer]




BVD_B_8(2VQS)
DNK_DROME
[Raw transfer]




AZZ_C_15(2JJ8)
DNK_DROME
[Raw transfer]




AZZ_D_16(2JJ8)
DNK_DROME
[Raw transfer]




CL9_A_4(2ZI9)
DCK_HUMAN
[Raw transfer]




AZZ_A_13(2JJ8)
DNK_DROME
[Raw transfer]




BVD_A_6(2VQS)
DNK_DROME
[Raw transfer]




3D1_A_4(2ZI3)
DCK_HUMAN
[Raw transfer]




ADP_A_3(2ZI9)
DCK_HUMAN
[Raw transfer]




ADP_A_3(2ZI3)
DCK_HUMAN
[Raw transfer]




LLT_A_4(3QEO)
DCK_HUMAN
[Raw transfer]




ADP_A_4(2ZI4)
DCK_HUMAN
[Raw transfer]




ADP_A_2(3HP1)
DCK_HUMAN
[Raw transfer]




3L1_A_6(2ZI5)
DCK_HUMAN
[Raw transfer]




51 PsiBlast_CBE 94.51100%-115 - C1 -2VP4 9.5 DNK_DROME
11 PsiBlast_PDB 94.1499%-115 - C1 -2JCS 10.2 DNK_DROME
50 PsiBlast_CBE 94.07100%-113 - C1 -2VP4 9.6 DNK_DROME
52 PsiBlast_CBE 94.03100%-116 - C1 -2VP4 9.7 DNK_DROME
54 PsiBlast_CBE 93.97100%-129 - C1 -2JJ8 4.7 DNK_DROME
13 PsiBlast_PDB 93.8999%-114 - C1 -1ZM7 10.8 DNK_DROME
22 PsiBlast_CBE 93.59100%-113 - C1 -2VP0 10.2 DNK_DROME
21 PsiBlast_CBE 93.54100%-113 - C1 -2VP0 10.3 DNK_DROME
56 PsiBlast_CBE 93.43100%-124 - C1 -2JJ8 5.0 DNK_DROME
69 HHSearch 92.89100%-111 - C1 -2VP4 10.0 DNK_DROME
33 PsiBlast_CBE 92.69100%-117 - C1 -2VQS 6.1 DNK_DROME
3 PsiBlast_PDB 92.20100%-124 - C1 -2JJ8 4.5 DNK_DROME
4 PsiBlast_PDB 91.81100%-113 - C1 -2VP2 10.6 DNK_DROME
32 PsiBlast_CBE 91.26100%-117 - C1 -2VQS 5.3 DNK_DROME
53 PsiBlast_CBE 91.21100%-114 - C1 -2VP2 10.4 DNK_DROME
31 PsiBlast_CBE 90.62100%-120 - C1 -2VQS 6.1 DNK_DROME
55 PsiBlast_CBE 90.44100%-123 - C1 -2JJ8 3.5 DNK_DROME
9 PsiBlast_PDB 89.80100%-116 - C1 -2VQS 5.6 DNK_DROME
60 PsiBlast_CBE 89.08100%-112 * C1 *1J90 4.8 DNK_DROME
1 PsiBlast_PDB 88.34100%-113 - C1 -1J90 5.3 DNK_DROME
10 PsiBlast_PDB 87.87100%-112 - C1 -2VPP 5.3 DNK_DROME
6 PsiBlast_PDB 87.33100%-112 - C1 -2VP5 4.9 DNK_DROME
49 PsiBlast_CBE 87.08100%-115 - C1 -2VP5 5.2 DNK_DROME
34 PsiBlast_CBE 87.05100%-116 - C1 -2VPP 5.3 DNK_DROME
70 HHSearch 68.4132% -90 - C1 -1P5Z 5.5 DCK_HUMAN
19 PsiBlast_PDB 67.9532%-100 - C1 -2ZI4 7.2 DCK_HUMAN
16 PsiBlast_PDB 67.5932%-100 - C1 -3HP1 7.4 DCK_HUMAN
18 PsiBlast_PDB 66.6932% -98 - C1 -2ZI9 7.2 DCK_HUMAN
17 PsiBlast_PDB 66.4932% -97 - C1 -2ZI3 8.1 DCK_HUMAN
14 PsiBlast_PDB 66.4233% -94 - C1 -3QEO 4.5 DCK_HUMAN
15 PsiBlast_PDB 66.0433% -98 - C1 -2A2Z 6.0 DCK_HUMAN
20 PsiBlast_PDB 60.7032% -99 - C1 -2ZI5 5.2 DCK_HUMAN