@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01833_MET_MO: (2014-09-28 )
MKAPTVLAPGILVLLLSLVQRSHGECKEALVKSEMNVNMKYQLPNFTAETPIQNVVLHGHHIYLGATNYIYVLNDKDLQKVSEFKTGPVLEHPDCLPCRDCSSKANSSGGVWKDNINMALLVDTYYDDQLISCGSVNRGTCQRHVLPPDNSADIQSEVHCMFSPEEESGQCPDCVVSALGAKVLLSEKDRFINFFVGNTINSSYPPGYSLHSISVRRLKETQDGFKFLTDQSYIDVLPEFLDSYPIKYIHAFESNHFIYFLTVQKETLDAQTFHTRIIRFCSVDSGLHSYMEMPLECILTEKRRKRSTREEVFNILQAAYVSKPGANLAKQIGASPSDDILFGVFAQSKPDSAEPVNRSAVCAFPIKYVNDFFNKIVNKNNVRCLQHFYGPNHEHCFNRTLLRNSSGCEARSDEYRTEFTTALQRVDLFMGRLNQVLLTSISTFIKGDLTIANLGTSEGRFMQVVLSRTAHLTPHVNFLLDSHPVSPEVIVEHPSNQNGYTLVVTGKKITKIPLNGLGCGHFQSCSQCLSAPYFIQCGWCHNQCVRFDECPSGTWTQEICLPAVYKVFPTSAPLEGGTVLTICGWDFGFRKNNKFDLRKTKVLLGNESCTLTLSESTTNTLKCTVGPAMSEHFNVSVIISNSRETTQYSAFSYVDPVITSISPRYGPQAGGTLLTLTGKYLNSGNSRHISIGGKTCTLKSVSDSILECYTPAQTTSDEFPVKLKIDLANRETSSFSYREDPVVYEIHPTKSFISGGSTITGIGKTLNSVSLPKLVIDVHEVGVNYTVACQHRSNSEIICCTTPSLKQLGLQLPLKTKAFFLLDGILSKHFDLTYVHNPVFEPFEKPVMISMGNENVVEIKGNNIDPEAVKGEVLKVGNQSCESLHWHSGAVLCTVPSDLLKLNSELNIEWKQAVSSTVLGKVIVQPDQNFAGLIIGAVSISVVVLLLSGLFLWMRKRKHKDLGSELVRYDARVHTPHLDRLVSARSVSPTTEMVSNESVDYRATFPEDQFPNSSQNGACRQVQYPLTDLSPILTSGDSDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIEEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITIYLLQGRRLLQPEYCPDALYEVMLKCWHPKAEMRPSFSELVSRISSIFSTFIGEHYVHVNATYVNVKCVAPYPSLLPSQDNIDGEGNT

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SX8_A_3(3DKF)

[Raw transfer]




SX8_A_3(3DKG)

[Raw transfer]




4K0_A_2(4AOI)

[Raw transfer]




0JL_A_2(4DEI)

[Raw transfer]




3QT_A_3(3QTI)
MET_HUMAN
[Raw transfer]




3QT_B_5(3QTI)

[Raw transfer]




0JK_A_2(4DEH)

[Raw transfer]




L5G_A_2(3CD8)

[Raw transfer]




M97_A_3(3RHK)
MET_HUMAN
[Raw transfer]




044_A_2(3U6I)

[Raw transfer]




03X_A_2(3U6H)

[Raw transfer]




L1X_A_2(4EEV)

[Raw transfer]




88Z_A_2(3LQ8)

[Raw transfer]




B2D_A_2(3I5N)

[Raw transfer]




MT4_B_4(3EFK)

[Raw transfer]




0JJ_A_2(4DEG)

[Raw transfer]




DF6_A_2(3VW8)

[Raw transfer]




319_A_2(3CTH)

[Raw transfer]




0J3_A_2(4GG5)

[Raw transfer]




CKK_A_2(3C1X)

[Raw transfer]




MT3_A_3(3EFJ)
MET_HUMAN
[Raw transfer]




ZZY_A_2(2WD1)

[Raw transfer]




LKG_A_2(3CCN)

[Raw transfer]




ATP_A_4(3DKC)

[Raw transfer]




MT4_A_3(3EFK)
MET_HUMAN
[Raw transfer]




0J8_A_2(4GG7)

[Raw transfer]




MT3_B_4(3EFJ)

[Raw transfer]




1FN_A_2(3CE3)

[Raw transfer]




L8V_A_2(3L8V)

[Raw transfer]




353_A_2(3F82)

[Raw transfer]




AM7_B_4(2RFN)

[Raw transfer]




AM8_A_2(2RFS)

[Raw transfer]




LUN_A_2(3QUP)

[Raw transfer]




KSA_B_2(1R0P)

[Raw transfer]




320_A_2(3CTJ)

[Raw transfer]




M97_B_4(3RHK)

[Raw transfer]




DFQ_A_5(3A4P)

[Raw transfer]




ANP_A_3(3PLS)

[Raw transfer]




AM7_A_3(2RFN)
MET_HUMAN
[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




IHX_B_7(3F66)

[Raw transfer]




IHX_A_3(3F66)
MET_HUMAN
[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




GBL_B_8(3F66)

[Raw transfer]




GBL_A_4(3F66)
MET_HUMAN
[Raw transfer]




GBL_A_3(2WD1)

[Raw transfer]




IPA_A_3(3A4P)

[Raw transfer]




21 PsiBlast_CBE 61.0898%-125 - C1 -3RHK 9.3
48 PsiBlast_CBE 61.0398%-122 - C1 -3F66 6.6 MET_HUMAN
35 PsiBlast_CBE 61.0298%-127 - C1 -3U6I 11.7
32 PsiBlast_CBE 60.8598%-126 - C1 -4DEI 10.0
33 PsiBlast_CBE 60.5498%-127 - C1 -4DEH 9.0
3 PsiBlast_PDB 60.5097%-126 - C1 -3C1X 11.1
34 PsiBlast_CBE 60.3598%-127 - C1 -4DEG 9.8
37 PsiBlast_CBE 60.3398%-128 - C1 -3I5N 10.0
18 PsiBlast_PDB 60.2198%-122 - C1 -3RHK 9.4 MET_HUMAN
20 PsiBlast_PDB 60.1297%-128 - C1 -3QTI 9.8 MET_HUMAN
39 PsiBlast_CBE 60.0798%-124 - C1 -4AOI 9.7
6 PsiBlast_PDB 60.0597%-122 - C1 -1R0P 9.7
19 PsiBlast_PDB 59.9497%-129 - C1 -3DKG 7.2
36 PsiBlast_CBE 59.7898%-124 - C1 -3U6H 11.2
16 PsiBlast_PDB 59.7598%-122 - C1 -4EEV 12.0
12 PsiBlast_PDB 59.5497%-121 - C1 -3L8V 9.7
2 PsiBlast_PDB 59.2198%-115 - C1 -3VW8 10.4
4 PsiBlast_PDB 59.1197%-114 - C1 -3DKC 6.7
5 PsiBlast_PDB 58.8897%-126 - C1 -3DKF 9.3
24 PsiBlast_CBE 58.8298%-124 - C1 -3EFK 10.8 MET_HUMAN
28 PsiBlast_CBE 58.6798%-125 - C1 -3CCN 9.0
26 PsiBlast_CBE 58.4798%-123 - C1 -3EFJ 10.7 MET_HUMAN
27 PsiBlast_CBE 58.4298%-124 - C1 -3CD8 10.4
31 PsiBlast_CBE 58.2998%-130 - C1 -2RFN 10.6 MET_HUMAN
50 PsiBlast_CBE 58.1898%-119 - C1 -2WD1 6.8
49 PsiBlast_CBE 57.8898%-121 - C1 -3LQ8 11.3
22 PsiBlast_CBE 57.7097%-127 - C1 -3QTI 9.8
23 PsiBlast_CBE 57.6398%-123 - C1 -3EFK 10.7
10 PsiBlast_PDB 57.6297%-120 - C1 -3CE3 9.7
9 PsiBlast_PDB 57.5997%-122 - C1 -3CTJ 9.6
11 PsiBlast_PDB 57.4097%-121 - C1 -3F82 11.1
30 PsiBlast_CBE 56.4798%-123 - C1 -2RFN 10.4
8 PsiBlast_PDB 55.9597%-120 - C1 -3CTH 8.6
47 PsiBlast_CBE 55.7498%-124 - C1 -3F66 6.4
13 PsiBlast_PDB 55.3897%-119 - C1 -3A4P 8.7
25 PsiBlast_CBE 55.0598%-119 - C1 -3EFJ 9.8
14 PsiBlast_PDB 54.2098%-116 - C1 -4GG5 8.9
29 PsiBlast_CBE 54.1698%-121 - C1 -2RFS 8.3
15 PsiBlast_PDB 53.6998%-111 - C1 -4GG7 9.1
65 HHSearch 50.3661%-110 - C1 -3PLS 4.8
74 HHSearch 38.6743%-108 * C1 *3QUP 7.3
76 HHSearch 37.1439% -90 - C1 -3CBL 8.3
52 Fugue 34.7440% -93 - C1 -1BYG 7.1 CSK_HUMAN
84 HHSearch 34.6435% -89 - C1 -3L9P 2.5