@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01833_RON_MO: (2014-09-28 )
MGLPLPLLQSSLLLMLLLRLSAASTNLNWQCPRIPYAASRDFSVKYVVPSFSAGGRVQATAAYEDSTNSAVFVATRNHLHVLGPDLQFIENLTTGPIGNPGCQTCASCGPGPHGPPKDTDTLVLVMEPGLPALVSCGSTLQGRCFLHELEPRGKALHLAAPACLFSANNNKPEACTDCVASPLGTRVTVVEQGHASYFYVASSLDPELAASFSPRSVSIRRLKSDTSGFQPGFPSLSVLPKYLASYLIKYVYSFHSGDFVYFLTVQPISVTSPPSALHTRLVRLNAVEPEIGDYRELVLDCHFAPKRRRRGAPEGTQPYPVLQAAHSAPVDAKLAVELSISEGQEVLFGVFVTVKDGGSGMGPNSVVCAFPIYHLNILIEEGVEYCCHSSNSSSLLSRGLDFFQTPSFCPNPPGGEASGPSSRCHYFPLMVHASFTRVDLFNGLLGSVKVTALHVTRLGNVTVAHMGTVDGRVLQVEIARSLNYLLYVSNFSLGSSGQPVHRDVSRLGNDLLFASGDQVFKVPIQGPGCRHFLTCWRCLRAQRFMGCGWCGDRCDRQKECPGSWQQDHCPPEISEFYPHSGPLRGTTRLTLCGSNFYLRPDDVVPEGTHQITVGQSPCRLLPKDSSSPRPGSLKEFIQELECELEPLVTQAVGTTNISLVITNMPAGKHFRVEGISVQEGFSFVEPVLTSIKPDFGPRAGGTYLTLEGQSLSVGTSRAVLVNGTQCRLEQVNEEQILCVTPPGAGTARVPLHLQIGGAEVPGSWTFHYKEDPIVLDISPKCGYSGSHIMIHGQHLTSAWHFTLSFHDGQSTVESRCAGQFVEQQQRRCRLPEYVVRNPQGWATGNLSVWGDGAAGFTLPGFRFLPPPSPLRAGLVELKPEEHSVKVEYVGLGAVADCVTVNMTVGGEVCQHELRGDVVICPLPPSLQLGKDGVPLQVCVDGGCHILSQVVRSSPGRASQRILLIALLVLILLVAVLAVALIFNSRRRKKQLGAHSLSPTTLSDINDTASGAPNHEESSESRDGTSVPLLRTESIRLQDLDRMLLAEVKDVLIPHEQVVIHTDQVIGKGHFGVVYHGEYTDGAQNQTHCAIKSLSRITEVQEVEAFLREGLLMRGLHHPNILALIGIMLPPEGLPRVLLPYMRHGDLLHFIRSPQRNPTVKDLVSFGLQVACGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARGVLDKEYYSVRQHRHARLPVKWMALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYPHIDPFDLSHFLAQGRRLPQPEYCPDSLYHVMLRCWEADPAARPTFRALVLEVKQVVASLLGDHYVQLTAAYVNVGPRAVDDGSVPPEQVQPSPQHCRSTSKPRPLSEPPLPT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SX8_A_3(3DKF)

[Raw transfer]




SX8_A_3(3DKG)

[Raw transfer]




3QT_A_3(3QTI)
MET_HUMAN
[Raw transfer]




319_A_2(3CTH)

[Raw transfer]




ANP_A_3(3KEX)
ERBB3_HUMAN
[Raw transfer]




ATP_A_4(3DKC)

[Raw transfer]




ANP_A_3(3PLS)

[Raw transfer]




L5G_A_2(3CD8)

[Raw transfer]




1FN_A_2(3CE3)

[Raw transfer]




353_A_2(3F82)

[Raw transfer]




MT3_A_3(3EFJ)
MET_HUMAN
[Raw transfer]




L8V_A_2(3L8V)

[Raw transfer]




320_A_2(3CTJ)

[Raw transfer]




AM7_A_3(2RFN)
MET_HUMAN
[Raw transfer]




CKK_A_2(3C1X)

[Raw transfer]




LUN_A_2(3QUP)

[Raw transfer]




AM8_A_2(2RFS)

[Raw transfer]




DFQ_A_5(3A4P)

[Raw transfer]




LKG_A_2(3CCN)

[Raw transfer]




KSA_B_2(1R0P)

[Raw transfer]




IPA_A_3(3A4P)

[Raw transfer]




2 PsiBlast_PDB 70.2487%-120 - C2 -3PLS 4.7
12 PsiBlast_PDB 65.8259%-121 - C2 -1R0P 8.8
15 PsiBlast_PDB 65.4659%-130 - C2 -3QTI 5.8 MET_HUMAN
5 PsiBlast_PDB 65.4059%-126 - C2 -3DKF 5.1
4 PsiBlast_PDB 65.3159%-114 - C2 -3DKC 6.8
19 PsiBlast_PDB 64.8960%-126 - C2 -3CD8 6.5
16 PsiBlast_PDB 64.6360%-130 - C2 -2RFN 10.7 MET_HUMAN
11 PsiBlast_PDB 64.6159%-121 - C2 -3L8V 9.4
3 PsiBlast_PDB 64.6059%-127 - C2 -3DKG 7.2
18 PsiBlast_PDB 64.4260%-124 - C2 -3CCN 5.0
20 PsiBlast_PDB 64.3060%-125 - C2 -3EFJ 10.7 MET_HUMAN
6 PsiBlast_PDB 64.1759%-124 - C2 -3C1X 11.0
10 PsiBlast_PDB 62.9559%-124 - C2 -3F82 10.8
14 PsiBlast_PDB 62.4759%-121 - C2 -3A4P 7.1
9 PsiBlast_PDB 62.3459%-119 - C2 -3CE3 9.5
7 PsiBlast_PDB 62.0159%-121 - C2 -3CTH 8.4
17 PsiBlast_PDB 61.9460%-122 - C2 -2RFS 6.5
8 PsiBlast_PDB 61.9259%-117 - C2 -3CTJ 9.2
45 HHSearch 53.9842%-118 * C2 *3QUP 7.3
53 HHSearch 45.2435% -95 - C2 -3KEX 4.5 ERBB3_HUMAN