@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02146_SIR2_H: (2014-09-28 )
MAEPDPSHPLETQAGKVQEAQDSDSDSEGGAAGGEADMDFLRNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKELEDLVRREHASIDAQSGAGVPNPSTSASPKKSPPPAKDEARTTEREKPQ

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AR6_B_11(3ZGV)
SIR2_HUMAN
[Raw transfer]




OAD_A_4(1Q1A)
HST2_YEAST
[Raw transfer]




AR6_A_5(3ZGV)
SIR2_HUMAN
[Raw transfer]




NAD_A_2(4BV3)
SIR3_HUMAN
[Raw transfer]




OAD_A_5(4BVH)
SIR3_HUMAN
[Raw transfer]




XYQ_A_5(2HJH)
SIR2_YEAST
[Raw transfer]




AR6_A_3(4BVB)
SIR3_HUMAN
[Raw transfer]




OAD_B_17(4BVG)
SIR3_HUMAN
[Raw transfer]




APR_A_6(4IAO)
SIR2_YEAST
[Raw transfer]




GOL_A_7(4BV3)
SIR3_HUMAN
[Raw transfer]




1NS_A_3(4JT9)
SIR3_HUMAN
[Raw transfer]




1NQ_A_3(4JSR)
SIR3_HUMAN
[Raw transfer]




1NR_A_3(4JT8)
SIR3_HUMAN
[Raw transfer]




GOL_B_13(3ZGV)
SIR2_HUMAN
[Raw transfer]




GOL_A_4(4JT9)
SIR3_HUMAN
[Raw transfer]




GOL_A_8(4BVG)
SIR3_HUMAN
[Raw transfer]




GOL_A_4(3U31)
SIR5_PLAF7
[Raw transfer]




GOL_A_6(4C7B)
SIR3_HUMAN
[Raw transfer]




BVB_A_4(4C7B)
SIR3_HUMAN
[Raw transfer]




OCZ_A_4(4BVH)
SIR3_HUMAN
[Raw transfer]




NCA_A_4(1YC5)
NPD_THEMA
[Raw transfer]




OCZ_A_2(4BVB)
SIR3_HUMAN
[Raw transfer]




PGE_C_13(3ZGO)
SIR2_HUMAN
[Raw transfer]




OCZ_A_4(4BV3)
SIR3_HUMAN
[Raw transfer]




EDO_A_7(3ZGO)
SIR2_HUMAN
[Raw transfer]




MES_D_19(4L3O)
?
[Raw transfer]




MES_A_10(4L3O)
?
[Raw transfer]




MES_C_15(4L3O)
?
[Raw transfer]




CHAIN_B_2(1YC5)
NPD_THEMA
[Raw transfer]

-

PGE_B_9(3ZGO)
SIR2_HUMAN
[Raw transfer]




PGE_A_6(3ZGO)
SIR2_HUMAN
[Raw transfer]




CHAIN_G_7(4L3O)
?
[Raw transfer]

-

CHAIN_B_2(3GLU)
SIR3_HUMAN
[Raw transfer]

-

MES_B_12(4L3O)
?
[Raw transfer]




PGE_B_14(3ZGV)
SIR2_HUMAN
[Raw transfer]




CHAIN_F_2(4HD8)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4FZ3)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(3GLR)
SIR3_HUMAN
[Raw transfer]

-

NCA_A_6(2HJH)
SIR2_YEAST
[Raw transfer]




CHAIN_F_6(4L3O)
?
[Raw transfer]

-

PEG_A_15(4BVG)
SIR3_HUMAN
[Raw transfer]




CHAIN_B_2(4C7B)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_C_2(4C78)
SIR3_HUMAN
[Raw transfer]

-

PIT_A_4(4HD8)
SIR3_HUMAN
[Raw transfer]




CHAIN_B_2(3GLT)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(1Q1A)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(4BVG)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4BVF)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4BVE)
SIR3_HUMAN
[Raw transfer]

-

24 PsiBlast_CBE 98.7199%-132 - C1 -3ZGO 2.0 SIR2_HUMAN
36 HHSearch 98.12100%-134 - C1 -3ZGO 2.9 SIR2_HUMAN
23 PsiBlast_CBE 96.2099%-132 - C1 -3ZGO 2.0 SIR2_HUMAN
3 PsiBlast_PDB 94.37100%-129 - C1 -4L3O 2.3 ?
26 PsiBlast_CBE 93.83100%-132 - C1 -4L3O 13.8 ?
27 PsiBlast_CBE 93.61100%-132 - C1 -4L3O 13.4 ?
25 PsiBlast_CBE 92.49100%-127 - C1 -4L3O 2.0 ?
22 PsiBlast_CBE 92.39100%-128 - C1 -3ZGV 10.6 SIR2_HUMAN
15 PsiBlast_PDB 78.6550%-123 - C1 -4BVB 10.5 SIR3_HUMAN
4 PsiBlast_PDB 78.3150%-124 - C1 -3GLR 7.6 SIR3_HUMAN
7 PsiBlast_PDB 78.1050%-126 - C1 -3GLU 4.9 SIR3_HUMAN
8 PsiBlast_PDB 77.8250%-122 - C1 -4JSR 9.2 SIR3_HUMAN
6 PsiBlast_PDB 77.5950%-120 - C1 -3GLT 15.3 SIR3_HUMAN
16 PsiBlast_PDB 77.5550%-125 - C1 -4BVE 15.0 SIR3_HUMAN
10 PsiBlast_PDB 77.4750%-123 - C1 -4JT9 7.3 SIR3_HUMAN
17 PsiBlast_PDB 77.4150%-119 - C1 -4BVF 14.5 SIR3_HUMAN
20 PsiBlast_PDB 77.3550%-122 - C1 -4C78 7.0 SIR3_HUMAN
14 PsiBlast_PDB 77.2150%-119 - C1 -4BV3 9.7 SIR3_HUMAN
19 PsiBlast_PDB 77.1250%-120 - C1 -4BVH 11.3 SIR3_HUMAN
18 PsiBlast_PDB 76.9450%-122 - C1 -4BVG 11.5 SIR3_HUMAN
12 PsiBlast_PDB 76.7350%-123 - C1 -4C7B 7.2 SIR3_HUMAN
9 PsiBlast_PDB 76.6850%-121 - C1 -4JT8 8.5 SIR3_HUMAN
13 PsiBlast_PDB 76.6050%-126 - C1 -4HD8 7.3 SIR3_HUMAN
30 Fugue 76.5930% -84 - C1 -4IAO 9.9 SIR2_YEAST
11 PsiBlast_PDB 75.9750%-123 - C1 -4FZ3 7.0 SIR3_HUMAN
38 HHSearch 74.8547%-112 - C1 -1Q1A 12.2 HST2_YEAST
40 HHSearch 70.4937%-115 - C1 -2HJH 11.7 SIR2_YEAST
43 HHSearch 61.6933%-120 * C1 *1YC5 7.5 NPD_THEMA