@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02196_BRAF_H: (2014-09-29 )
MAALSGGGGGGAEPGQALFNGDMEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEHIEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTVTSSSSSSLSVLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSPSAPASDSIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVHINTIEPVNIDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0WP_B_4(4G9C)

[Raw transfer]




BR2_A_3(3SKC)
BRAF_HUMAN
[Raw transfer]




FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]




TV4_A_3(3TV4)
BRAF_HUMAN
[Raw transfer]




RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]




L1E_B_3(3IDP)

[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




BR2_B_4(3SKC)

[Raw transfer]




TV4_B_4(3TV4)

[Raw transfer]




RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]




B0R_A_3(3TV6)
BRAF_HUMAN
[Raw transfer]




FNI_B_4(3PPK)

[Raw transfer]




0WP_A_3(4G9C)
BRAF_HUMAN
[Raw transfer]




L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




B0R_B_4(3TV6)

[Raw transfer]




RI9_B_4(4EHG)

[Raw transfer]




SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




DFS_B_4(4MBJ)

[Raw transfer]




SM7_A_3(3PSD)
BRAF_HUMAN
[Raw transfer]




T1Q_B_4(4E4X)

[Raw transfer]




1SU_A_3(4KSP)
BRAF_HUMAN
[Raw transfer]




FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]




B1E_B_4(4G9R)

[Raw transfer]




SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]




FOI_B_4(3PPJ)

[Raw transfer]




SM7_B_4(3PSD)

[Raw transfer]




SM5_B_4(3D4Q)

[Raw transfer]




SM6_B_4(3PSB)

[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




B1E_A_3(4G9R)
BRAF_HUMAN
[Raw transfer]




DFS_A_3(4MBJ)
BRAF_HUMAN
[Raw transfer]




10Z_A_4(4H58)
BRAF_HUMAN
[Raw transfer]




FP3_B_4(3PRF)

[Raw transfer]




BAX_B_4(1UWH)

[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]




B96_C_7(4JVG)
BRAF_HUMAN
[Raw transfer]




BAX_B_4(1UWJ)

[Raw transfer]




B96_B_5(4JVG)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3OMV)

[Raw transfer]




324_B_4(3C4C)

[Raw transfer]




B96_A_6(4JVG)
BRAF_HUMAN
[Raw transfer]




B96_D_8(4JVG)

[Raw transfer]




324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]




FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




734_B_4(4E26)

[Raw transfer]




831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]




831_B_6(3II5)

[Raw transfer]




RSW_A_3(3Q4C)
BRAF_HUMAN
[Raw transfer]




23 PsiBlast_CBE 97.85100%-115 - C2 -4EHE 8.2
3 PsiBlast_PDB 97.58100%-117 - C2 -3PSB 7.5 BRAF_HUMAN
13 PsiBlast_PDB 97.53100%-116 - C2 -4E26 5.1 BRAF_HUMAN
15 PsiBlast_PDB 97.42100%-118 - C2 -4G9C 9.5 BRAF_HUMAN
27 PsiBlast_CBE 96.99100%-117 - C2 -3TV4 7.8
41 PsiBlast_CBE 96.80100%-122 - C2 -4H58 7.3 BRAF_HUMAN
34 PsiBlast_CBE 96.79100%-115 - C2 -3PPJ 7.4
22 PsiBlast_CBE 96.76100%-120 - C2 -4G9C 9.9
40 PsiBlast_CBE 96.65100%-118 - C2 -4KSP 9.8 BRAF_HUMAN
25 PsiBlast_CBE 96.62100%-118 - C2 -4E26 3.7
9 PsiBlast_PDB 96.62100%-117 - C2 -3PSD 8.3 BRAF_HUMAN
14 PsiBlast_PDB 96.54100%-123 - C2 -4E4X 9.9 BRAF_HUMAN
26 PsiBlast_CBE 96.36100%-116 - C2 -3TV6 8.6
20 PsiBlast_PDB 96.30100%-122 - C2 -4MBJ 5.1 BRAF_HUMAN
5 PsiBlast_PDB 96.21100%-121 - C2 -3PPK 9.0 BRAF_HUMAN
4 PsiBlast_PDB 96.20100%-115 - C2 -3PPJ 7.6 BRAF_HUMAN
11 PsiBlast_PDB 96.18100%-119 - C2 -3TV4 7.8 BRAF_HUMAN
6 PsiBlast_PDB 96.07100%-122 - C2 -3PRF 8.3 BRAF_HUMAN
29 PsiBlast_CBE 96.06100%-116 - C2 -3PSD 8.2
32 PsiBlast_CBE 95.94100%-119 - C2 -3PRF 7.3
21 PsiBlast_CBE 95.65100%-119 - C2 -3II5 10.1
38 PsiBlast_CBE 95.6299%-117 - C2 -3IDP 10.8
8 PsiBlast_PDB 95.43100%-119 - C2 -3Q4C 7.9 BRAF_HUMAN
18 PsiBlast_PDB 95.3699%-119 - C2 -4EHG 7.7 BRAF_HUMAN
35 PsiBlast_CBE 95.31100%-117 - C2 -3D4Q 6.6
33 PsiBlast_CBE 95.25100%-117 - C2 -3PPK 8.4
28 PsiBlast_CBE 95.23100%-113 - C2 -3SKC 9.3
24 PsiBlast_CBE 95.23100%-115 - C2 -4E4X 9.5
39 PsiBlast_CBE 94.94100%-117 - C2 -4MBJ 7.1
12 PsiBlast_PDB 94.93100%-118 - C2 -3TV6 8.4 BRAF_HUMAN
30 PsiBlast_CBE 94.84100%-117 - C2 -3PSB 7.7
42 PsiBlast_CBE 94.7099%-118 - C2 -1UWH 9.0
43 PsiBlast_CBE 94.6199%-117 - C2 -1UWH 9.1 BRAF_HUMAN
19 PsiBlast_PDB 94.4899%-117 - C2 -3IDP 10.8 BRAF_HUMAN
2 PsiBlast_PDB 94.39100%-115 - C2 -3D4Q 7.0 BRAF_HUMAN
37 PsiBlast_CBE 94.2799%-120 - C2 -4EHG 8.7
10 PsiBlast_PDB 94.26100%-121 - C2 -3SKC 8.6 BRAF_HUMAN
16 PsiBlast_PDB 93.92100%-117 - C2 -4EHE 8.0 BRAF_HUMAN
1 PsiBlast_PDB 93.26100%-114 - C2 -3II5 10.4 BRAF_HUMAN
7 PsiBlast_PDB 92.81100%-115 - C2 -3PRI 7.5 BRAF_HUMAN
31 PsiBlast_CBE 92.80100%-115 - C2 -3PRI 7.7
36 PsiBlast_CBE 92.6099%-111 - C2 -4G9R 10.9
17 PsiBlast_PDB 92.4099%-111 - C2 -4G9R 10.8 BRAF_HUMAN
44 PsiBlast_CBE 91.9199%-108 - C2 -1UWJ 8.8
48 PsiBlast_CBE 91.8294%-118 - C2 -4JVG 9.1 BRAF_HUMAN
66 HHSearch 91.7394%-118 - C2 -3OG7 9.8 BRAF_HUMAN
46 PsiBlast_CBE 90.6294%-114 - C2 -4JVG 8.6
47 PsiBlast_CBE 90.6194%-114 - C2 -4JVG 8.4 BRAF_HUMAN
49 PsiBlast_CBE 90.2694%-116 - C2 -4JVG 8.4 BRAF_HUMAN
45 PsiBlast_CBE 89.9499%-110 - C2 -1UWJ 9.4 BRAF_HUMAN
50 PsiBlast_CBE 89.8794%-116 - C2 -3C4C 6.1
51 PsiBlast_CBE 89.7694%-106 - C2 -3C4C 8.2 BRAF_HUMAN
54 PsiBlast_CBE 88.5377%-117 - C2 -3OMV 4.4 RAF1_HUMAN
53 PsiBlast_CBE 87.8477%-119 - C2 -3OMV 6.4
79 HHSearch 67.4232% -93 - C2 -2IVS - RET_HUMAN