@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02274_DDAH1_: (2014-09-29 )
MAGLSHPSVFGRATHAVVRAPPESLCRHALRRSQGEEVDFARAERQHQLYVGVLGSKLGLQVVQLPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADSLHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDMAANCIYLNIPSKGHVLLHRTPEEYPESAKVYEKLKDHLLIPVSNSEMEKVDGLLTCCSVFINKKTDS

Atome Classification :

(15 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LN7_A_3(3P8E)
DDAH1_HUMAN
[Raw transfer]




LN5_A_3(3I4A)
DDAH1_HUMAN
[Raw transfer]




LN5_B_4(3I4A)
DDAH1_HUMAN
[Raw transfer]




LN7_B_4(3P8E)
DDAH1_HUMAN
[Raw transfer]




LN6_A_3(3P8P)
DDAH1_HUMAN
[Raw transfer]




CIR_A_2(2C6Z)
DDAH1_BOVIN
[Raw transfer]




LN6_B_4(3P8P)
DDAH1_HUMAN
[Raw transfer]




D20_B_4(2JAJ)
DDAH1_HUMAN
[Raw transfer]




D20_A_3(2JAJ)
DDAH1_HUMAN
[Raw transfer]




HCS_A_3(2CI5)
DDAH1_BOVIN
[Raw transfer]




HCS_B_4(2CI5)
DDAH1_BOVIN
[Raw transfer]




GLY_A_2(2CI7)
DDAH1_BOVIN
[Raw transfer]




CIR_A_2(1H70)
DDAH_PSEAE
[Raw transfer]




SMZ_A_3(3BPB)
DDAH_PSEAE
[Raw transfer]




HM3_A_3(3RHY)
DDAH_PSEAE
[Raw transfer]




21 PsiBlast_CBE 98.1692%-118 - C3 -2CI5 3.5 DDAH1_BOVIN
6 PsiBlast_PDB 98.1392%-118 - C3 -2C6Z 4.2 DDAH1_BOVIN
3 PsiBlast_PDB 97.8193%-117 - C3 -3P8E 3.4 DDAH1_HUMAN
19 PsiBlast_CBE 97.5393%-118 - C3 -2JAJ 3.7 DDAH1_HUMAN
9 PsiBlast_PDB 97.3792%-117 - C3 -2CI5 3.4 DDAH1_BOVIN
11 PsiBlast_PDB 97.2092%-117 - C3 -2CI7 2.5 DDAH1_BOVIN
4 PsiBlast_PDB 97.1493%-119 - C3 -2JAJ 3.6 DDAH1_HUMAN
2 PsiBlast_PDB 97.1093%-112 - C3 -3I4A 3.7 DDAH1_HUMAN
5 PsiBlast_PDB 97.0192%-117 - C3 -3P8P 3.8 DDAH1_HUMAN
17 PsiBlast_CBE 96.6193%-116 - C3 -3P8E 2.8 DDAH1_HUMAN
18 PsiBlast_CBE 96.4493%-117 - C3 -3I4A 3.4 DDAH1_HUMAN
20 PsiBlast_CBE 96.3992%-111 - C3 -3P8P 3.2 DDAH1_HUMAN
12 PsiBlast_PDB 65.8631% -91 - C3 -3RHY 3.2 DDAH_PSEAE
13 PsiBlast_PDB 65.8230% -97 - C3 -1H70 3.1 DDAH_PSEAE
14 PsiBlast_PDB 64.6030% -88 - C3 -3BPB 2.8 DDAH_PSEAE