@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02375_KDM4C_: (2014-09-29 )
MEVAEVESPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLERKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKLCTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPASTPEVKAWLQRRRKVRKASRSFQCARSTSKRPKADEEEEVSDEVDGAEVPNPDSVTDDLKVSEKSEAAVKLRNTEASSEEESSASRMQVEQNLSDHIKLSGNSCLSTSVTEDIKTEDDKAYAYRSVPSISSEADDSIPLSSGYEKPEKSDPSELSWPKSPESCSSVAESNGVLTEGEESDVESHGNGLEPGEIPAVPSGERNSFKVPSIAEGENKTSKSWRHPLSRPPARSPMTLVKQQAPSDEELPEVLSIEEEVEETESWAKPLIHLWQTKSPNFAAEQEYNATVARMKPHCAICTLLMPYHKPDSSNEENDARWETKLDEVVTSEGKTKPLIPEMCFIYSEENIEYSPPNAFLEEDGTSLLISCAKCCVRVHASCYGIPSHEICDGWLCARCKRNAWTAECCLCNLRGGALKQTKNNKWAHVMCAVAVPEVRFTNVPERTQIDVGRIPLQRLKLKCIFCRHRVKRVSGACIQCSYGRCPASFHVTCAHAAGVLMEPDDWPYVVNITCFRHKVNPNVKSKACEKVISVGQTVITKHRNTRYYSCRVMAVTSQTFYEVMFDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVKWPDGKLYGAKYFGSNIAHMYQVEFEDG

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

Y28_B_8(2WWJ)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2PXJ)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2PXJ)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2XML)
KDM4C_HUMAN
[Raw transfer]



OGA_A_3(2XML)
KDM4C_HUMAN
[Raw transfer]



OGA_B_10(2OT7)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2OT7)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2OQ6)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2Q8E)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2OS2)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2OS2)
KDM4A_HUMAN
[Raw transfer]



OGA_B_8(2OQ7)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2Q8E)
KDM4A_HUMAN
[Raw transfer]



OGA_A_10(2OX0)
KDM4A_HUMAN
[Raw transfer]



OGA_A_9(2P5B)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2P5B)
KDM4A_HUMAN
[Raw transfer]



2HG_B_9(2YBK)
KDM4A_HUMAN
[Raw transfer]



AKG_A_5(2GP5)
KDM4A_HUMAN
[Raw transfer]



OGA_B_10(2OQ6)
KDM4A_HUMAN
[Raw transfer]



OGA_B_11(2OX0)
KDM4A_HUMAN
[Raw transfer]



Y28_A_7(2WWJ)
KDM4A_HUMAN
[Raw transfer]



08P_B_10(3U4S)
KDM4A_HUMAN
[Raw transfer]



HQ2_B_9(3RVH)
KDM4A_HUMAN
[Raw transfer]



AKG_B_10(2Q8C)
KDM4A_HUMAN
[Raw transfer]



2HG_A_6(2YBK)
KDM4A_HUMAN
[Raw transfer]



AKG_A_9(2Q8C)
KDM4A_HUMAN
[Raw transfer]



2HG_B_11(2YBP)
KDM4A_HUMAN
[Raw transfer]



HQ2_A_5(3RVH)
KDM4A_HUMAN
[Raw transfer]



AKG_B_8(2GP5)
KDM4A_HUMAN
[Raw transfer]



8HQ_B_11(4BIS)
?
[Raw transfer]



S2G_A_8(2YBS)
KDM4A_HUMAN
[Raw transfer]



SIN_A_9(2Q8D)
KDM4A_HUMAN
[Raw transfer]



0WS_B_12(4GD4)
KDM4A_HUMAN
[Raw transfer]



KC6_A_5(3PDQ)
KDM4A_HUMAN
[Raw transfer]



SIN_B_10(2Q8D)
KDM4A_HUMAN
[Raw transfer]



2HG_A_8(2YBP)
KDM4A_HUMAN
[Raw transfer]



8HQ_A_6(4BIS)
?
[Raw transfer]



8XQ_A_5(3NJY)
KDM4A_HUMAN
[Raw transfer]



DZA_B_11(4AI9)
KDM4A_HUMAN
[Raw transfer]



PD2_B_8(2VD7)
KDM4A_HUMAN
[Raw transfer]



PD2_A_5(2VD7)
KDM4A_HUMAN
[Raw transfer]



KC6_B_13(3PDQ)
KDM4A_HUMAN
[Raw transfer]



OGA_A_4(4IGQ)
?
[Raw transfer]



8XQ_B_8(3NJY)
KDM4A_HUMAN
[Raw transfer]



DZA_A_7(4AI9)
KDM4A_HUMAN
[Raw transfer]



0WS_A_6(4GD4)
KDM4A_HUMAN
[Raw transfer]



S2G_B_11(2YBS)
KDM4A_HUMAN
[Raw transfer]



AKG_A_2(3OPT)
RPH1_YEAST
[Raw transfer]



CHAIN_D_4(3U4S)
KDM4A_HUMAN
[Raw transfer]
-
OXY_B_13(2P5B)
KDM4A_HUMAN
[Raw transfer]



OXY_A_11(2P5B)
KDM4A_HUMAN
[Raw transfer]



CHAIN_J_4(2PXJ)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_I_3(2PXJ)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_G_4(2Q8E)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_F_3(2Q8D)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_F_3(2Q8E)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_G_4(2Q8D)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_G_4(2Q8C)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2OT7)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2OT7)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2OS2)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2OX0)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2OQ6)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2OQ6)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2OX0)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_F_3(2Q8C)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2OS2)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2YBS)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_D_4(2YBP)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_I_3(2P5B)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_I_3(2P5B)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2YBP)
KDM4A_HUMAN
[Raw transfer]
-
CHAIN_C_3(2YBS)
KDM4A_HUMAN
[Raw transfer]
-
1 PsiBlast_PDB 97.84100% -93 - C7 -2XML 2.8 KDM4C_HUMAN
21 PsiBlast_CBE 97.81100% -93 - C7 -2XML 2.8 KDM4C_HUMAN
19 PsiBlast_PDB 94.8581% -91 - C7 -2GP5 2.9 KDM4A_HUMAN
7 PsiBlast_PDB 94.7980% -82 - C7 -2VD7 3.9 KDM4A_HUMAN
30 PsiBlast_CBE 94.7780% -82 - C7 -2YBP 10.2 KDM4A_HUMAN
11 PsiBlast_PDB 94.7380% -84 - C7 -3PDQ 3.8 KDM4A_HUMAN
2 PsiBlast_PDB 94.7180% -81 - C7 -2OQ6 8.6 KDM4A_HUMAN
31 PsiBlast_CBE 94.6380% -81 - C7 -2YBK 3.7 KDM4A_HUMAN
29 PsiBlast_CBE 94.4980% -84 - C7 -2YBS 9.9 KDM4A_HUMAN
10 PsiBlast_PDB 94.4880% -85 - C7 -2YBS 9.5 KDM4A_HUMAN
41 PsiBlast_CBE 94.4481% -87 - C7 -2Q8E 4.2 KDM4A_HUMAN
12 PsiBlast_PDB 94.4380% -83 - C7 -2YBK 3.8 KDM4A_HUMAN
61 HHSearch 94.3579% -81 - C7 -2OX0 8.7 KDM4A_HUMAN
26 PsiBlast_CBE 94.3480% -83 - C7 -3RVH 5.0 KDM4A_HUMAN
43 PsiBlast_CBE 94.1381% -87 - C7 -2Q8D 4.2 KDM4A_HUMAN
32 PsiBlast_CBE 94.1380% -80 - C7 -2VD7 4.2 KDM4A_HUMAN
45 PsiBlast_CBE 94.0981% -87 - C7 -2Q8C 4.2 KDM4A_HUMAN
23 PsiBlast_CBE 94.0980% -86 - C7 -4BIS 4.0 ?
4 PsiBlast_PDB 94.0580% -82 - C7 -2OS2 10.2 KDM4A_HUMAN
17 PsiBlast_PDB 94.0380% -81 - C7 -4BIS 3.6 ?
14 PsiBlast_PDB 93.9580% -85 - C7 -3RVH 5.2 KDM4A_HUMAN
16 PsiBlast_PDB 93.9480% -84 - C7 -4AI9 3.4 KDM4A_HUMAN
15 PsiBlast_PDB 93.9380% -84 - C7 -4GD4 3.8 KDM4A_HUMAN
8 PsiBlast_PDB 93.9080% -86 - C7 -3NJY 3.6 KDM4A_HUMAN
35 PsiBlast_CBE 93.8880% -79 - C7 -2OS2 10.0 KDM4A_HUMAN
24 PsiBlast_CBE 93.8280% -85 - C7 -4AI9 3.6 KDM4A_HUMAN
37 PsiBlast_CBE 93.7980% -81 - C7 -2OQ6 8.2 KDM4A_HUMAN
22 PsiBlast_CBE 93.7580% -85 - C7 -4GD4 3.6 KDM4A_HUMAN
20 PsiBlast_PDB 93.7381% -84 - C7 -2P5B 10.7 KDM4A_HUMAN
38 PsiBlast_CBE 93.6881% -89 - C7 -2GP5 3.2 KDM4A_HUMAN
5 PsiBlast_PDB 93.6480% -81 - C7 -2OT7 7.9 KDM4A_HUMAN
25 PsiBlast_CBE 93.6380% -80 - C7 -3U4S 3.3 KDM4A_HUMAN
36 PsiBlast_CBE 93.5980% -81 - C7 -2OQ7 3.0 KDM4A_HUMAN
33 PsiBlast_CBE 93.4080% -82 - C7 -2OX0 8.6 KDM4A_HUMAN
50 PsiBlast_CBE 93.3381% -84 - C7 -2PXJ 4.5 KDM4A_HUMAN
28 PsiBlast_CBE 93.3380% -83 - C7 -3NJY 4.3 KDM4A_HUMAN
9 PsiBlast_PDB 93.1780% -83 - C7 -2YBP 10.4 KDM4A_HUMAN
27 PsiBlast_CBE 93.1680% -83 - C7 -3PDQ 4.5 KDM4A_HUMAN
34 PsiBlast_CBE 93.1280% -79 - C7 -2OT7 7.7 KDM4A_HUMAN
46 PsiBlast_CBE 92.9881% -86 - C7 -2P5B 2.9 KDM4A_HUMAN
42 PsiBlast_CBE 92.8781% -86 - C7 -2Q8D 5.3 KDM4A_HUMAN
49 PsiBlast_CBE 92.6581% -85 - C7 -2PXJ 4.5 KDM4A_HUMAN
40 PsiBlast_CBE 92.6581% -89 - C7 -2Q8E 5.5 KDM4A_HUMAN
47 PsiBlast_CBE 92.6281% -88 - C7 -2WWJ 6.5 KDM4A_HUMAN
44 PsiBlast_CBE 92.4581% -89 - C7 -2Q8C 5.3 KDM4A_HUMAN
48 PsiBlast_CBE 91.8081% -80 - C7 -2WWJ 6.5 KDM4A_HUMAN
62 HHSearch 87.4066% -80 - C7 -3DXT - KDM4D_HUMAN
63 HHSearch 72.6543% -68 - C7 -3OPT 3.2 RPH1_YEAST
64 HHSearch 67.1333% -58 * C7 *4IGQ 3.3 ?