@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02542_ISPF_E: (2014-09-30 )
GSHMLEMRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUD_D_4(1U43)
ISPF_ECOLI
[Raw transfer]



CDM_A_3(1U40)
ISPF_ECOLI
[Raw transfer]



CDP_A_4(1U3L)
ISPF_ECOLI
[Raw transfer]



GOL_A_4(3GHZ)
ISPF_SALTY
[Raw transfer]



GOL_C_9(3GHZ)
ISPF_SALTY
[Raw transfer]



1AA_E_18(2AMT)
ISPF_ECOLI
[Raw transfer]



CDP_B_7(1GX1)
ISPF_ECOLI
[Raw transfer]



C5P_D_16(1H47)
ISPF_ECOLI
[Raw transfer]



CDP_B_10(1GX1)
ISPF_ECOLI
[Raw transfer]



1AA_D_19(2AMT)
ISPF_ECOLI
[Raw transfer]



CDP_A_5(1GX1)
ISPF_ECOLI
[Raw transfer]



CDP_A_4(1YQN)
ISPF_ECOLI
[Raw transfer]



C_A_3(1W55)
ISPDF_CAMJE
[Raw transfer]



C5P_A_9(1H48)
ISPF_ECOLI
[Raw transfer]



CDI_D_17(1H48)
ISPF_ECOLI
[Raw transfer]



CDI_A_7(1H48)
ISPF_ECOLI
[Raw transfer]



C5P_A_9(1H47)
ISPF_ECOLI
[Raw transfer]



1AA_A_13(2AMT)
ISPF_ECOLI
[Raw transfer]



CTN_C_24(3T80)
ISPF_SALTY
[Raw transfer]



CAR_E_16(3ERN)
ISPF_ECOLI
[Raw transfer]



CTN_B_17(3T80)
ISPF_SALTY
[Raw transfer]



CDP_A_4(4C81)
ISPF_PLAF7
[Raw transfer]



C5P_A_5(2PMP)
ISPF_ARATH
[Raw transfer]



C5P_E_23(1H48)
ISPF_ECOLI
[Raw transfer]



CAR_A_8(3ERN)
ISPF_ECOLI
[Raw transfer]



F01_A_5(3ELC)
ISPF_ECOLI
[Raw transfer]



CAR_D_15(3ERN)
ISPF_ECOLI
[Raw transfer]



C5P_D_19(1H48)
ISPF_ECOLI
[Raw transfer]



F01_C_9(3ELC)
ISPF_ECOLI
[Raw transfer]



CTN_A_10(3T80)
ISPF_SALTY
[Raw transfer]



CAR_C_13(3ERN)
ISPF_ECOLI
[Raw transfer]
29 PsiBlast_CBE 97.48100%-132 - C12 -1H48 3.0 ISPF_ECOLI
27 PsiBlast_CBE 97.39100%-134 - C12 -3ELC 3.1 ISPF_ECOLI
26 PsiBlast_CBE 97.08100%-132 - C12 -3ELC 3.1 ISPF_ECOLI
64 HHSearch 96.98100%-130 - C12 -1GX1 - ISPF_ECOLI
25 PsiBlast_CBE 96.96100%-133 - C12 -3ERN 2.6 ISPF_ECOLI
36 PsiBlast_CBE 96.93100%-126 - C12 -1H47 3.3 ISPF_ECOLI
1 PsiBlast_PDB 96.90100%-131 - C12 -3ELC - ISPF_ECOLI
33 PsiBlast_CBE 96.86100%-124 - C12 -1H47 3.3 ISPF_ECOLI
23 PsiBlast_CBE 96.61100%-131 - C12 -3ERN 2.8 ISPF_ECOLI
34 PsiBlast_CBE 96.50100%-126 - C12 -1H47 - ISPF_ECOLI
39 PsiBlast_CBE 96.29100%-132 - C12 -2AMT 3.2 ISPF_ECOLI
3 PsiBlast_PDB 96.18100%-131 - C12 -3ERN - ISPF_ECOLI
37 PsiBlast_CBE 96.12100%-126 - C12 -1H47 - ISPF_ECOLI
24 PsiBlast_CBE 96.10100%-132 - C12 -3ERN 3.1 ISPF_ECOLI
35 PsiBlast_CBE 96.08100%-128 - C12 -1H47 - ISPF_ECOLI
7 PsiBlast_PDB 95.90100%-131 - C12 -1H48 3.6 ISPF_ECOLI
6 PsiBlast_PDB 95.79100%-128 - C12 -1H47 - ISPF_ECOLI
13 PsiBlast_PDB 95.60100%-126 - C12 -2AMT 3.5 ISPF_ECOLI
42 PsiBlast_CBE 95.56100%-126 - C12 -2AMT - ISPF_ECOLI
11 PsiBlast_PDB 95.50100%-130 - C12 -1U40 3.3 ISPF_ECOLI
17 PsiBlast_PDB 95.4398%-131 - C12 -3T80 2.9 ISPF_SALTY
48 PsiBlast_CBE 95.3798%-127 - C12 -3GHZ 2.3 ISPF_SALTY
40 PsiBlast_CBE 95.35100%-126 - C12 -2AMT - ISPF_ECOLI
32 PsiBlast_CBE 95.29100%-131 - C12 -1H48 - ISPF_ECOLI
9 PsiBlast_PDB 95.22100%-133 - C12 -1U3L 3.6 ISPF_ECOLI
38 PsiBlast_CBE 95.20100%-127 - C12 -2AMT 4.1 ISPF_ECOLI
21 PsiBlast_CBE 95.08100%-133 - C12 -3ERN 3.0 ISPF_ECOLI
30 PsiBlast_CBE 95.05100%-128 - C12 -1H48 3.9 ISPF_ECOLI
16 PsiBlast_PDB 94.7598%-127 - C12 -3GHZ 3.3 ISPF_SALTY
41 PsiBlast_CBE 94.70100%-126 - C12 -2AMT - ISPF_ECOLI
12 PsiBlast_PDB 94.29100%-129 - C12 -1U43 2.8 ISPF_ECOLI
15 PsiBlast_PDB 93.2998%-123 - C12 -1YQN 3.5 ISPF_ECOLI
46 PsiBlast_CBE 92.0598%-133 - C12 -3T80 3.1 ISPF_SALTY
47 PsiBlast_CBE 90.3798%-127 - C12 -3T80 3.1 ISPF_SALTY
50 PsiBlast_CBE 84.8198% -93 - C12 -1GX1 3.9 ISPF_ECOLI
51 PsiBlast_CBE 84.5698% -95 - C12 -1GX1 2.5 ISPF_ECOLI
65 HHSearch 84.1162%-127 - C12 -4C8E - ISPF_BURCJ
72 HHSearch 80.7850%-123 - C12 -1W55 3.5 ISPDF_CAMJE
66 HHSearch 80.0448%-118 - C12 -2PMP 3.4 ISPF_ARATH
69 HHSearch 72.8539%-113 - C12 -4C81 3.3 ISPF_PLAF7
68 HHSearch 72.0139%-123 - C12 -2UZH - ?