@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02786_ACCC_ECOLI: (2014-10-01 )
MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]



ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]



ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]



ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]



ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]



ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]



AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]



ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]



ADP_B_6(3RV3)
ACCC_ECOLI
[Raw transfer]



ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]



ADP_B_8(3RUP)
ACCC_ECOLI
[Raw transfer]



GOL_A_8(3RV4)
ACCC_ECOLI
[Raw transfer]



JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]



OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]



JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]



LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]



LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]



L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]



JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]



OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]



L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]



OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]



OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]



OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3RUP)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]



BTN_B_9(3G8C)
ACCC_ECOLI
[Raw transfer]



MOH_A_9(3RV4)
ACCC_ECOLI
[Raw transfer]



BTN_A_5(3G8C)
ACCC_ECOLI
[Raw transfer]
35 PsiBlast_CBE 90.52100%-102 - C1 -2V59 6.3 ACCC_ECOLI
31 PsiBlast_CBE 90.33100%-102 - C1 -2W6N 6.6 ACCC_ECOLI
40 PsiBlast_CBE 89.7999%-100 - C1 -1DV2 4.5 ACCC_ECOLI
27 PsiBlast_CBE 88.62100%-102 - C1 -2W70 4.0 ACCC_ECOLI
45 PsiBlast_CBE 88.3899%-102 - C1 -3G8D 5.4 ACCC_ECOLI
12 PsiBlast_PDB 87.94100%-104 - C1 -2W6O 4.1 ACCC_ECOLI
44 PsiBlast_CBE 87.66100%-101 - C1 -3G8C 6.2 ACCC_ECOLI
16 PsiBlast_PDB 87.58100%-104 - C1 -2W70 4.1 ACCC_ECOLI
2 PsiBlast_PDB 87.26100%-100 - C1 -3JZI 8.4 ACCC_ECOLI
43 PsiBlast_CBE 87.01100%-101 * C1 *3G8C 6.3 ACCC_ECOLI
8 PsiBlast_PDB 86.82100%-103 - C1 -2V59 6.2 ACCC_ECOLI
21 PsiBlast_CBE 86.29100%-103 - C1 -3JZI 9.7 ACCC_ECOLI
22 PsiBlast_CBE 85.53100%-101 - C1 -3JZF 9.9 ACCC_ECOLI
11 PsiBlast_PDB 85.42100%-101 - C1 -2W6N 6.5 ACCC_ECOLI
5 PsiBlast_PDB 85.42100%-103 - C1 -2J9G 5.6 ACCC_ECOLI
13 PsiBlast_PDB 85.17100%-103 - C1 -2W6P 5.9 ACCC_ECOLI
41 PsiBlast_CBE 85.1499%-104 - C1 -1DV2 6.0 ACCC_ECOLI
39 PsiBlast_CBE 84.26100%-103 - C1 -3RUP 7.7 ACCC_ECOLI
20 PsiBlast_PDB 84.01100%-103 - C1 -3RV3 7.2 ACCC_ECOLI
42 PsiBlast_CBE 83.9999%-102 - C1 -3RV4 8.3 ACCC_ECOLI
30 PsiBlast_CBE 83.19100%-104 - C1 -2W6O 3.8 ACCC_ECOLI
38 PsiBlast_CBE 82.55100%-104 - C1 -3RV3 7.7 ACCC_ECOLI
6 PsiBlast_PDB 82.02100%-105 - C1 -2VR1 4.6 ACCC_ECOLI
19 PsiBlast_PDB 81.66100%-100 - C1 -3RUP 7.2 ACCC_ECOLI
47 PsiBlast_CBE 42.3371% -97 - C1 -2VQD 7.8 ACCC_PSEAE