@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02799_NMT1_HUMAN: (2014-10-02 )
MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

646_B_6(3IWE)
NMT1_HUMAN
[Raw transfer]



646_A_4(3IWE)
NMT1_HUMAN
[Raw transfer]



646_A_3(2WSA)
?
[Raw transfer]



2CB_A_3(4A31)
?
[Raw transfer]



646_A_6(2YND)
?
[Raw transfer]



4XB_A_5(4B14)
?
[Raw transfer]



2CD_A_3(4A32)
?
[Raw transfer]



7I1_A_4(4B11)
?
[Raw transfer]



096_B_6(3IU2)
NMT1_HUMAN
[Raw transfer]



X25_A_4(4B13)
?
[Raw transfer]



NHW_A_6(4B14)
?
[Raw transfer]



MYA_A_3(3IWE)
NMT1_HUMAN
[Raw transfer]



MYA_B_5(3IU2)
NMT1_HUMAN
[Raw transfer]



VIQ_A_3(4A2Z)
?
[Raw transfer]



MYA_A_5(4A30)
?
[Raw transfer]



MYA_B_5(3IWE)
NMT1_HUMAN
[Raw transfer]



NHW_A_5(4B11)
?
[Raw transfer]



096_A_4(3IU2)
NMT1_HUMAN
[Raw transfer]



MYA_A_3(3JTK)
NMT1_HUMAN
[Raw transfer]



MYA_B_4(3IU1)
NMT1_HUMAN
[Raw transfer]



NHW_A_5(4B13)
?
[Raw transfer]



MYA_A_3(3IU2)
NMT1_HUMAN
[Raw transfer]



NHW_A_5(2YNE)
?
[Raw transfer]



NHW_A_5(4A95)
?
[Raw transfer]



MYA_A_2(2WSA)
?
[Raw transfer]



C23_A_4(4B12)
?
[Raw transfer]



NHW_A_5(4B10)
?
[Raw transfer]



MYA_B_5(3JTK)
NMT1_HUMAN
[Raw transfer]



MYA_A_4(4A2Z)
?
[Raw transfer]



NHW_A_5(2YND)
?
[Raw transfer]



QMI_A_4(4A30)
?
[Raw transfer]



NHW_A_5(4BBH)
?
[Raw transfer]



MYA_A_4(4A32)
?
[Raw transfer]



MYA_A_2(3H5Z)
?
[Raw transfer]



NHW_A_5(4B12)
?
[Raw transfer]



YNC_A_5(2YNC)
?
[Raw transfer]



MYA_A_4(4A31)
?
[Raw transfer]



9MT_A_4(4A95)
?
[Raw transfer]



X55_A_4(3JTK)
NMT1_HUMAN
[Raw transfer]



YBN_A_6(4BBH)
?
[Raw transfer]



YNE_A_6(2YNE)
?
[Raw transfer]



EDO_A_3(3H5Z)
?
[Raw transfer]
4 PsiBlast_PDB 93.86100%-131 - C1 -3JTK 14.3 NMT1_HUMAN
3 PsiBlast_PDB 93.34100%-131 - C1 -3IWE 14.2 NMT1_HUMAN
2 PsiBlast_PDB 92.93100%-128 * C1 *3IU2 14.4 NMT1_HUMAN
23 PsiBlast_CBE 90.69100%-131 - C1 -3JTK 14.5 NMT1_HUMAN
25 PsiBlast_CBE 89.72100%-130 - C1 -3IU2 14.4 NMT1_HUMAN
26 PsiBlast_CBE 89.65100%-129 - C1 -3IU1 14.5 NMT1_HUMAN
24 PsiBlast_CBE 88.30100%-129 - C1 -3IWE 14.4 NMT1_HUMAN
14 PsiBlast_PDB 51.1454%-128 - C1 -2YND 14.7 ?
6 PsiBlast_PDB 50.2854%-125 - C1 -4B11 14.7 ?
13 PsiBlast_PDB 48.3554%-125 - C1 -2YNE 14.6 ?
5 PsiBlast_PDB 48.3454%-127 - C1 -4B10 12.7 ?
12 PsiBlast_PDB 48.2654%-126 - C1 -2YNC 14.5 ?
8 PsiBlast_PDB 47.8854%-127 - C1 -4B13 14.6 ?
15 PsiBlast_PDB 46.6041%-119 - C1 -2WSA 14.3 ?
10 PsiBlast_PDB 46.4854%-124 - C1 -4A95 14.6 ?
16 PsiBlast_PDB 45.9941%-121 - C1 -3H5Z 14.3 ?
17 PsiBlast_PDB 45.9741%-122 - C1 -4A2Z 14.3 ?
7 PsiBlast_PDB 45.6554%-123 - C1 -4B12 13.5 ?
11 PsiBlast_PDB 45.5654%-124 - C1 -4BBH 14.5 ?
9 PsiBlast_PDB 44.7854%-125 - C1 -4B14 14.0 ?
19 PsiBlast_PDB 44.4541%-120 - C1 -4A31 14.1 ?
18 PsiBlast_PDB 43.7941%-121 - C1 -4A30 14.5 ?
20 PsiBlast_PDB 38.9341%-118 - C1 -4A32 14.2 ?