@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02799_NMT_PLAF7: (2014-10-02 )
MNDDKKDFVGRDLYQLIRNAKDKIKIDYKFWYTQPVPKINDEFDENVNEPFISDNKVEDVRKEEYKLPSGYAWCVCDITKENDRSDIYNLLTDNYVEDDDNVFRFNYSSEFLLWALSSPNYVKNWHIGVKYESTNKLVGFISAIPIDMCVNKNIIKMAEVNFLCVHKSLRSKRLAPVLIKEITRRINLESIWQAIYTAGVYLPKPISTARYFHRSINVKKLIEIGFSCLNTRLTMSRAIKLYRIDDTLNIKNLRLMKKKDIDGLQKLLNEHLKQYNLHAIFSKEDVAHWFTPIDQVIYTYVNEENGEIKDLISFYSLPSKVLGNNKYNILNAAFSFYNITTTTTFKNLIQDAICLAKRNNFDVFNALEVMDNYSVFQDLKFGEGDGSLKYYLYNWKCASCHPSKIGIVLL

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4XB_B_10(4B14)
?
[Raw transfer]




4XB_C_16(4B14)
?
[Raw transfer]




646_A_6(2YND)
?
[Raw transfer]




646_B_12(2YND)
?
[Raw transfer]




646_C_17(2YND)
?
[Raw transfer]




4XB_A_5(4B14)
?
[Raw transfer]




7I1_B_10(4B11)
?
[Raw transfer]




7I1_A_4(4B11)
?
[Raw transfer]




2CB_A_3(4A31)
?
[Raw transfer]




646_A_3(2WSA)
?
[Raw transfer]




X25_A_4(4B13)
?
[Raw transfer]




646_A_4(3IWE)
NMT1_HUMAN
[Raw transfer]




X25_B_8(4B13)
?
[Raw transfer]




C23_B_11(4B12)
?
[Raw transfer]




2CD_A_3(4A32)
?
[Raw transfer]




C23_C_19(4B12)
?
[Raw transfer]




C23_A_4(4B12)
?
[Raw transfer]




X25_C_13(4B13)
?
[Raw transfer]




VIQ_A_3(4A2Z)
?
[Raw transfer]




9MT_A_4(4A95)
?
[Raw transfer]




QMI_A_4(4A30)
?
[Raw transfer]




096_A_4(3IU2)
NMT1_HUMAN
[Raw transfer]




9MT_B_8(4A95)
?
[Raw transfer]




NHW_B_9(4B13)
?
[Raw transfer]




NHW_A_5(4A95)
?
[Raw transfer]




NHW_C_17(4B14)
?
[Raw transfer]




MYA_A_2(2WSA)
?
[Raw transfer]




NHW_A_5(4B11)
?
[Raw transfer]




NHW_B_11(4BBH)
?
[Raw transfer]




NHW_B_9(4B10)
?
[Raw transfer]




MYA_A_5(4A30)
?
[Raw transfer]




MYA_A_4(4A2Z)
?
[Raw transfer]




NHW_B_11(4B11)
?
[Raw transfer]




NHW_B_11(2YND)
?
[Raw transfer]




NHW_A_5(2YNE)
?
[Raw transfer]




NHW_A_5(4B13)
?
[Raw transfer]




NHW_A_6(4B14)
?
[Raw transfer]




NHW_A_5(4B12)
?
[Raw transfer]




NHW_B_11(4B14)
?
[Raw transfer]




NHW_B_9(4A95)
?
[Raw transfer]




YNE_A_6(2YNE)
?
[Raw transfer]




NHW_C_20(4B12)
?
[Raw transfer]




NHW_A_5(4B10)
?
[Raw transfer]




YBN_C_17(4BBH)
?
[Raw transfer]




YNE_C_18(2YNE)
?
[Raw transfer]




MYA_A_4(4A32)
?
[Raw transfer]




MYA_A_2(3H5Z)
?
[Raw transfer]




NHW_C_17(2YNE)
?
[Raw transfer]




MYA_A_3(3JTK)
NMT1_HUMAN
[Raw transfer]




NHW_C_14(4A95)
?
[Raw transfer]




MYA_A_3(3IWE)
NMT1_HUMAN
[Raw transfer]




NHW_C_16(2YND)
?
[Raw transfer]




YNC_C_15(2YNC)
?
[Raw transfer]




MYA_A_3(3IU2)
NMT1_HUMAN
[Raw transfer]




NHW_C_14(4B13)
?
[Raw transfer]




YBN_A_6(4BBH)
?
[Raw transfer]




NHW_A_5(4BBH)
?
[Raw transfer]




NHW_A_5(2YND)
?
[Raw transfer]




NHW_B_12(4B12)
?
[Raw transfer]




YNE_B_13(2YNE)
?
[Raw transfer]




NHW_B_12(2YNE)
?
[Raw transfer]




YNC_A_5(2YNC)
?
[Raw transfer]




NHW_C_16(4BBH)
?
[Raw transfer]




9MT_C_13(4A95)
?
[Raw transfer]




MYA_A_4(4A31)
?
[Raw transfer]




YBN_B_12(4BBH)
?
[Raw transfer]




X55_A_4(3JTK)
NMT1_HUMAN
[Raw transfer]




EDO_A_3(3H5Z)
?
[Raw transfer]




1 PsiBlast_PDB 99.2880%-134 - C1 -2YND 14.6 ?
32 PsiBlast_CBE 98.0380%-133 - C1 -4B10 14.5 ?
3 PsiBlast_PDB 97.5780%-132 - C1 -4B11 14.6 ?
24 PsiBlast_CBE 97.4680%-133 - C1 -4B14 13.6 ?
30 PsiBlast_CBE 97.3080%-131 - C1 -4B11 14.7 ?
7 PsiBlast_PDB 97.2880%-131 - C1 -4A95 14.5 ?
9 PsiBlast_PDB 97.1980%-131 - C1 -2YNC 14.5 ?
38 PsiBlast_CBE 97.0080%-130 - C1 -2YNE 14.6 ?
2 PsiBlast_PDB 96.8480%-133 - C1 -4B10 12.5 ?
34 PsiBlast_CBE 96.6580%-133 - C1 -4BBH 14.6 ?
22 PsiBlast_CBE 96.5780%-130 - C1 -2YND 14.4 ?
28 PsiBlast_CBE 96.5680%-131 - C1 -4B12 14.8 ?
10 PsiBlast_PDB 96.4480%-133 - C1 -2YNE 14.5 ?
8 PsiBlast_PDB 96.1880%-132 - C1 -4BBH 14.4 ?
5 PsiBlast_PDB 95.9080%-134 - C1 -4B13 14.5 ?
4 PsiBlast_PDB 95.4680%-129 - C1 -4B12 14.3 ?
36 PsiBlast_CBE 95.1580%-130 - C1 -4A95 14.5 ?
26 PsiBlast_CBE 95.0580%-132 - C1 -4B13 14.7 ?
6 PsiBlast_PDB 95.0180%-132 - C1 -4B14 13.8 ?
40 PsiBlast_CBE 89.2480%-129 * C1 *2YNC 14.3 ?
27 PsiBlast_CBE 88.1380%-128 - C1 -4B12 14.4 ?
35 PsiBlast_CBE 85.7780%-129 - C1 -4A95 14.7 ?
37 PsiBlast_CBE 85.4780%-130 - C1 -2YNE 14.2 ?
21 PsiBlast_CBE 85.0380%-127 - C1 -2YND 14.3 ?
33 PsiBlast_CBE 84.9280%-130 - C1 -4BBH 14.2 ?
25 PsiBlast_CBE 84.2180%-130 - C1 -4B13 14.2 ?
23 PsiBlast_CBE 83.6380%-128 - C1 -4B14 14.1 ?
13 PsiBlast_PDB 63.8551%-127 - C1 -3IWE 14.1 NMT1_HUMAN
14 PsiBlast_PDB 63.5251%-127 - C1 -3JTK 14.1 NMT1_HUMAN
12 PsiBlast_PDB 62.2251%-126 - C1 -3IU2 14.2 NMT1_HUMAN
17 PsiBlast_PDB 57.9940%-123 - C1 -4A2Z 14.2 ?
16 PsiBlast_PDB 57.6740%-124 - C1 -3H5Z 13.9 ?
19 PsiBlast_PDB 57.2540%-120 - C1 -4A31 14.0 ?
20 PsiBlast_PDB 57.1940%-119 - C1 -4A32 13.9 ?
18 PsiBlast_PDB 57.1840%-121 - C1 -4A30 14.5 ?
15 PsiBlast_PDB 56.1640%-122 - C1 -2WSA 14.0 ?