@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02799_NMT_YEAST: (2014-10-02 )
MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NHW_A_5(4B13)
?
[Raw transfer]



MYA_D_4(1IIC)
NMT_YEAST
[Raw transfer]



NHM_B_2(2NMT)
NMT_YEAST
[Raw transfer]



NHW_A_5(4B11)
?
[Raw transfer]



MYA_A_2(2WSA)
?
[Raw transfer]



NHM_A_5(1IID)
NMT_YEAST
[Raw transfer]



NHW_A_5(4A95)
?
[Raw transfer]



NHW_A_5(4B10)
?
[Raw transfer]



MYA_A_3(3JTK)
NMT1_HUMAN
[Raw transfer]



NHW_A_5(4BBH)
?
[Raw transfer]



MYA_C_3(1IIC)
NMT_YEAST
[Raw transfer]



MYA_A_3(3IU2)
NMT1_HUMAN
[Raw transfer]



NHW_A_5(2YND)
?
[Raw transfer]



MYA_A_3(3IWE)
NMT1_HUMAN
[Raw transfer]



NHW_A_6(4B14)
?
[Raw transfer]



NHW_A_5(4B12)
?
[Raw transfer]



MYA_C_3(1IYK)
NMT_CANAL
[Raw transfer]



YNC_A_5(2YNC)
?
[Raw transfer]



GOL_G_7(1NMT)
NMT_CANAL
[Raw transfer]



GOL_L_12(1NMT)
NMT_CANAL
[Raw transfer]



GOL_F_6(1NMT)
NMT_CANAL
[Raw transfer]



646_A_3(2WSA)
?
[Raw transfer]



GOL_D_4(2NMT)
NMT_YEAST
[Raw transfer]



MIM_C_3(2NMT)
NMT_YEAST
[Raw transfer]



646_A_4(3IWE)
NMT1_HUMAN
[Raw transfer]



646_A_6(2YND)
?
[Raw transfer]



MIM_D_4(1IYK)
NMT_CANAL
[Raw transfer]



7I1_A_4(4B11)
?
[Raw transfer]



X25_A_4(4B13)
?
[Raw transfer]



4XB_A_5(4B14)
?
[Raw transfer]



C23_A_4(4B12)
?
[Raw transfer]



096_A_4(3IU2)
NMT1_HUMAN
[Raw transfer]



9MT_A_4(4A95)
?
[Raw transfer]



YBN_A_6(4BBH)
?
[Raw transfer]



X55_A_4(3JTK)
NMT1_HUMAN
[Raw transfer]



CHAIN_O_2(1IID)
NMT_YEAST
[Raw transfer]
-
2 PsiBlast_PDB 83.87100%-117 - C1 -1IIC 14.1 NMT_YEAST
39 PsiBlast_CBE 82.16100%-115 - C1 -1IIC 14.2 NMT_YEAST
3 PsiBlast_PDB 79.39100%-115 - C1 -1IID 13.6 NMT_YEAST
1 PsiBlast_PDB 72.46100%-113 - C1 -2NMT 13.9 NMT_YEAST
12 PsiBlast_PDB 46.1442%-121 - C1 -2YND 14.6 ?
5 PsiBlast_PDB 45.4054%-119 - C1 -1IYK 13.2 NMT_CANAL
13 PsiBlast_PDB 43.6842%-119 - C1 -4B10 12.1 ?
16 PsiBlast_PDB 43.5242%-119 - C1 -4B13 14.3 ?
19 PsiBlast_PDB 42.6542%-119 * C1 *4BBH 14.5 ?
18 PsiBlast_PDB 42.1942%-119 - C1 -4A95 14.6 ?
10 PsiBlast_PDB 42.1644%-119 - C1 -3JTK 14.0 NMT1_HUMAN
15 PsiBlast_PDB 41.5942%-118 - C1 -4B12 13.1 ?
20 PsiBlast_PDB 39.5142%-117 - C1 -2YNC 14.2 ?
17 PsiBlast_PDB 39.4942%-118 - C1 -4B14 13.7 ?
14 PsiBlast_PDB 39.2442%-117 - C1 -4B11 14.6 ?
11 PsiBlast_PDB 38.8041%-119 - C1 -2WSA 14.2 ?
4 PsiBlast_PDB 38.6554%-113 - C1 -1NMT 2.4 NMT_CANAL
9 PsiBlast_PDB 36.8344%-117 - C1 -3IWE 13.9 NMT1_HUMAN
8 PsiBlast_PDB 33.3344%-115 - C1 -3IU2 14.0 NMT1_HUMAN