@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF03098_PGH1_MOUSE: (2014-10-05 )
MSRRSLSLWFPLLLLLLLPPTPSVLLADPGVPSPVNPCCYYPCQNQGVCVRFGLDNYQCDCTRTGYSGPNCTIPEIWTWLRNSLRPSPSFTHFLLTHGYWLWEFVNATFIREVLMRLVLTVRSNLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDVQLLAQQLLLRREFIPAPQGTNILFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYHLRLFKDGKLKYQVLDGEVYPPSVEQASVLMRYPPGVPPERQMAVGQEVFGLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGETIKIVIEEYVQHLSGYFLQLKFDPELLFRAQFQYRNRIAMEFNHLYHWHPLMPNSFQVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQRAGRIGGGRNFDYHVLHVAVDVIKESREMRLQPFNEYRKRFGLKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLLLEKCQPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKPSTFGGDVGFNLVNTASLKKLVCLNTKTCPYVSFRVPDYPGDDGSVLVRRSTEL

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BFL_A_17(1Q4G)
PGH1_SHEEP
[Raw transfer]




BFL_B_18(1Q4G)
PGH1_SHEEP
[Raw transfer]




IBP_B_19(1EQG)
PGH1_SHEEP
[Raw transfer]




IBP_A_17(1EQG)
PGH1_SHEEP
[Raw transfer]




FLP_B_17(1CQE)
PGH1_SHEEP
[Raw transfer]




FLP_B_16(3N8Z)
PGH1_SHEEP
[Raw transfer]




EPA_A_9(1IGX)
PGH1_SHEEP
[Raw transfer]




FLP_A_16(1CQE)
PGH1_SHEEP
[Raw transfer]




FLP_A_16(2AYL)
PGH1_SHEEP
[Raw transfer]




FLP_A_10(3N8Z)
PGH1_SHEEP
[Raw transfer]




FLP_B_17(2AYL)
PGH1_SHEEP
[Raw transfer]




FLP_B_19(1EQH)
PGH1_SHEEP
[Raw transfer]




FL2_B_19(1HT5)
PGH1_SHEEP
[Raw transfer]




FLP_A_17(1EQH)
PGH1_SHEEP
[Raw transfer]




NIM_B_12(3N8X)
PGH1_SHEEP
[Raw transfer]




MXM_B_12(4O1Z)
?
[Raw transfer]




FLP_A_4(3N8W)
PGH1_SHEEP
[Raw transfer]




LAX_A_9(1FE2)
PGH1_SHEEP
[Raw transfer]




MXM_A_7(4O1Z)
?
[Raw transfer]




ACD_A_10(1DIY)
PGH1_SHEEP
[Raw transfer]




FL2_A_17(1HT5)
PGH1_SHEEP
[Raw transfer]




34C_A_15(1HT8)
PGH1_SHEEP
[Raw transfer]




NIM_A_7(3N8X)
PGH1_SHEEP
[Raw transfer]




34C_B_17(1HT8)
PGH1_SHEEP
[Raw transfer]




IM8_P_9(2OYE)
PGH1_SHEEP
[Raw transfer]




ACD_A_10(1U67)
PGH1_SHEEP
[Raw transfer]




IMM_A_10(1PGG)
PGH1_SHEEP
[Raw transfer]




IMS_P_7(2OYU)
PGH1_SHEEP
[Raw transfer]




IMM_B_12(1PGG)
PGH1_SHEEP
[Raw transfer]




ISF_A_12(1PGE)
PGH1_SHEEP
[Raw transfer]




GOL_B_9(3N8V)
PGH1_SHEEP
[Raw transfer]




ISF_B_14(1PGE)
PGH1_SHEEP
[Raw transfer]




IMM_B_12(1PGF)
PGH1_SHEEP
[Raw transfer]




DIF_A_4(3N8Y)
PGH1_SHEEP
[Raw transfer]




IMM_A_10(1PGF)
PGH1_SHEEP
[Raw transfer]




BOG_A_3(1Q4G)
PGH1_SHEEP
[Raw transfer]




BOG_A_4(3N8V)
PGH1_SHEEP
[Raw transfer]




BOG_B_10(1Q4G)
PGH1_SHEEP
[Raw transfer]




BOG_B_7(2AYL)
PGH1_SHEEP
[Raw transfer]




BOG_A_3(2AYL)
PGH1_SHEEP
[Raw transfer]




BOG_A_8(3N8W)
PGH1_SHEEP
[Raw transfer]




BOG_B_13(3N8X)
PGH1_SHEEP
[Raw transfer]




BOG_B_15(1EQH)
PGH1_SHEEP
[Raw transfer]




BOG_A_7(1HT8)
PGH1_SHEEP
[Raw transfer]




BOG_A_3(1HT5)
PGH1_SHEEP
[Raw transfer]




BOG_B_15(1EQG)
PGH1_SHEEP
[Raw transfer]




BOG_A_8(1EQH)
PGH1_SHEEP
[Raw transfer]




BGC_A_6(1IGX)
PGH1_SHEEP
[Raw transfer]




BOG_B_13(1HT8)
PGH1_SHEEP
[Raw transfer]




BOG_A_8(1EQG)
PGH1_SHEEP
[Raw transfer]




BOG_A_6(1PGE)
PGH1_SHEEP
[Raw transfer]




BOG_B_10(1PGE)
PGH1_SHEEP
[Raw transfer]




BOG_A_10(1CQE)
PGH1_SHEEP
[Raw transfer]




BOG_B_12(1CQE)
PGH1_SHEEP
[Raw transfer]




BOG_A_7(3N8Y)
PGH1_SHEEP
[Raw transfer]




17 PsiBlast_PDB 96.1089%-106 - C1 -3N8V 4.5 PGH1_SHEEP
34 PsiBlast_CBE 86.3789%-105 - C1 -1Q4G 6.7 PGH1_SHEEP
20 PsiBlast_PDB 86.2489%-106 - C1 -3N8Y 6.6 PGH1_SHEEP
29 PsiBlast_CBE 85.4789%-106 - C1 -3N8Z 6.8 PGH1_SHEEP
33 PsiBlast_CBE 85.4489%-104 - C1 -2AYL 7.3 PGH1_SHEEP
30 PsiBlast_CBE 83.9889%-105 - C1 -3N8X 6.0 PGH1_SHEEP
35 PsiBlast_CBE 83.4789%-104 - C1 -3N8W - PGH1_SHEEP
19 PsiBlast_PDB 83.0189%-104 - C1 -3N8X 6.4 PGH1_SHEEP
18 PsiBlast_PDB 81.9989%-104 - C1 -3N8W 6.7 PGH1_SHEEP
16 PsiBlast_PDB 77.3089%-103 - C1 -2AYL 7.3 PGH1_SHEEP
31 PsiBlast_CBE 75.3489%-104 - C1 -3N8V 2.3 PGH1_SHEEP
15 PsiBlast_PDB 74.4789%-104 - C1 -1Q4G 6.7 PGH1_SHEEP
27 PsiBlast_CBE 71.7287%-106 - C1 -4O1Z 4.7 ?
28 PsiBlast_CBE 70.3689%-101 - C1 -3N8Z 7.1 PGH1_SHEEP
13 PsiBlast_PDB 69.3287%-105 - C1 -4O1Z 5.0 ?
23 PsiBlast_CBE 61.1887%-105 - C1 -1CQE 6.2 PGH1_SHEEP
37 PsiBlast_CBE 60.5589%-106 - C1 -1HT8 6.1 PGH1_SHEEP
14 PsiBlast_PDB 59.1889%-101 - C1 -1DIY 6.5 PGH1_SHEEP
38 PsiBlast_CBE 56.4989%-104 - C1 -1HT5 5.6 PGH1_SHEEP
2 PsiBlast_PDB 52.4587%-104 - C1 -2OYU 5.3 PGH1_SHEEP
36 PsiBlast_CBE 47.4289%-105 * C1 *1HT8 6.3 PGH1_SHEEP
11 PsiBlast_PDB 44.5287%-101 - C1 -1IGX 6.6 PGH1_SHEEP
3 PsiBlast_PDB 44.5287%-105 - C1 -1CQE 6.3 PGH1_SHEEP
12 PsiBlast_PDB 44.5187%-102 - C1 -1U67 4.3 PGH1_SHEEP
39 PsiBlast_CBE 42.4189%-104 - C1 -1HT5 5.6 PGH1_SHEEP
1 PsiBlast_PDB 41.0287%-101 - C1 -2OYE 8.5 PGH1_SHEEP
9 PsiBlast_PDB 40.3387%-101 - C1 -1FE2 5.1 PGH1_SHEEP
21 PsiBlast_CBE 38.7887%-105 - C1 -1EQH 7.0 PGH1_SHEEP
24 PsiBlast_CBE 37.9187%-104 - C1 -1PGG 6.0 PGH1_SHEEP
25 PsiBlast_CBE 33.6487%-104 - C1 -1PGF 6.7 PGH1_SHEEP
8 PsiBlast_PDB 32.8887%-104 - C1 -1PGG 6.0 PGH1_SHEEP
5 PsiBlast_PDB 31.1887%-104 - C1 -1EQH 7.1 PGH1_SHEEP
7 PsiBlast_PDB 29.6587%-103 - C1 -1PGF 6.5 PGH1_SHEEP
4 PsiBlast_PDB 24.8687%-103 - C1 -1EQG 6.4 PGH1_SHEEP
26 PsiBlast_CBE 24.1187%-102 - C1 -1PGE 6.3 PGH1_SHEEP
22 PsiBlast_CBE 23.9787%-103 - C1 -1EQG 6.2 PGH1_SHEEP
6 PsiBlast_PDB 15.1287%-102 - C1 -1PGE 6.4 PGH1_SHEEP