@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF03119_DNLJ_STAAU: (2014-10-06 )
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTGKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVDKQNELNS

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]



3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]



0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]



3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]



0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]



0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]



AMP_D_10(2OWO)
DNLJ_ECOLI
[Raw transfer]



3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]



GOL_A_10(3BA9)
DNLJ_ENTFA
[Raw transfer]



0XT_A_4(4GLW)
DNLJ_STRZP
[Raw transfer]



0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]



GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]



AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]



AMP_A_5(1V9P)
DNLJ_THEFI
[Raw transfer]



AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]



1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]



1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]



AMP_A_2(3SGI)
DNLJ_MYCTU
[Raw transfer]



NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]
-
NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]
-
2 PsiBlast_PDB 87.8644% -81 - C1 -2OWO 6.8 DNLJ_ECOLI
4 PsiBlast_PDB 86.6144% -85 - C1 -4GLX 8.2 DNLJ_ECOLI
5 PsiBlast_PDB 83.8345% -74 - C1 -1V9P 5.0 DNLJ_THEFI
3 PsiBlast_PDB 78.5744% -67 - C1 -1DGS 5.2 DNLJ_THEFI
18 PsiBlast_PDB 29.7457% -56 - C1 -4EFE 7.0 DNLJ_ENTFA
17 PsiBlast_PDB 29.3457% -57 * C1 *4EFB 6.5 DNLJ_ENTFA
10 PsiBlast_PDB 28.8557% -57 - C1 -3BA9 8.3 DNLJ_ENTFA
16 PsiBlast_PDB 28.6257% -54 - C1 -4EEQ 5.1 DNLJ_ENTFA
9 PsiBlast_PDB 27.8457% -54 - C1 -3BA8 6.4 DNLJ_ENTFA
11 PsiBlast_PDB 27.8157% -54 - C1 -3BAA 8.1 DNLJ_ENTFA
13 PsiBlast_PDB 27.6957% -53 - C1 -4LH6 4.6 DNLJ_ENTFA
15 PsiBlast_PDB 27.3157% -54 - C1 -1TA8 2.3 DNLJ_ENTFA
14 PsiBlast_PDB 26.2557% -53 - C1 -4LH7 4.6 DNLJ_ENTFA
12 PsiBlast_PDB 25.8757% -53 - C1 -3BAB 8.1 DNLJ_ENTFA
20 PsiBlast_PDB 17.6347% -41 - C1 -3UQ8 6.4 DNLJ_HAEIN
7 PsiBlast_PDB 10.4638% -40 - C1 -3SGI 4.4 DNLJ_MYCTU
19 PsiBlast_PDB 7.4851% -46 - C1 -4GLW 5.0 DNLJ_STRZP