@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF03167_UNG_HUMAN: (2014-10-06 )
MIGQKTLYSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARNVPVGFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FCF_A_2(3FCF)
UNG_HUMAN
[Raw transfer]



3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]



302_B_2(2HXM)
UNG_HUMAN
[Raw transfer]



3FL_A_3(3FCL)
UNG_HUMAN
[Raw transfer]



3FL_B_8(3FCL)
UNG_HUMAN
[Raw transfer]



GOL_B_5(1OKB)
?
[Raw transfer]



GOL_A_3(1OKB)
?
[Raw transfer]



URA_B_5(1Q3F)
UNG_HUMAN
[Raw transfer]



FCK_B_2(3FCK)
UNG_HUMAN
[Raw transfer]



URA_D_4(1SSP)
UNG_HUMAN
[Raw transfer]



URA_D_4(1EMJ)
UNG_HUMAN
[Raw transfer]



URA_D_4(4SKN)
UNG_HUMAN
[Raw transfer]



CHAIN_B_1(2OYT)
UNG_HUMAN
[Raw transfer]
-
NACID_A_1(2SSP)
UNG_HUMAN
[Raw transfer]
-
NACID_B_1(1EMJ)
UNG_HUMAN
[Raw transfer]
-
NACID_B_2(1SSP)
UNG_HUMAN
[Raw transfer]
-
CHAIN_C_2(2OYT)
UNG_HUMAN
[Raw transfer]
-
NACID_C_2(1EMH)
UNG_HUMAN
[Raw transfer]
-
IMD_A_3(3TKB)
UNG_HUMAN
[Raw transfer]



NACID_A_1(1SSP)
UNG_HUMAN
[Raw transfer]
-
NACID_B_1(1Q3F)
UNG_HUMAN
[Raw transfer]
-
NACID_A_1(4SKN)
UNG_HUMAN
[Raw transfer]
-
NACID_B_1(2OXM)
UNG_HUMAN
[Raw transfer]
-
CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]
-
NACID_B_1(1EMH)
UNG_HUMAN
[Raw transfer]
-
21 PsiBlast_CBE 93.29100% -98 - C1 -3FCL 5.7 UNG_HUMAN
12 PsiBlast_PDB 93.19100%-100 * C1 *3FCK 4.4 UNG_HUMAN
13 PsiBlast_PDB 90.50100% -98 - C1 -3FCL 5.5 UNG_HUMAN
11 PsiBlast_PDB 90.37100% -98 - C1 -3FCI 6.1 UNG_HUMAN
9 PsiBlast_PDB 87.96100% -99 - C1 -2OYT 9.1 UNG_HUMAN
10 PsiBlast_PDB 86.34100% -96 - C1 -3FCF 6.9 UNG_HUMAN
3 PsiBlast_PDB 86.31100%-101 - C1 -1EMH 10.6 UNG_HUMAN
2 PsiBlast_PDB 83.73100% -98 - C1 -1SSP 7.5 UNG_HUMAN
14 PsiBlast_PDB 80.7299% -96 - C1 -2SSP 6.0 UNG_HUMAN
16 PsiBlast_PDB 80.6699% -96 - C1 -3TKB 2.7 UNG_HUMAN
6 PsiBlast_PDB 80.61100% -93 - C1 -2HXM 7.3 UNG_HUMAN
5 PsiBlast_PDB 80.57100% -98 - C1 -1Q3F 8.6 UNG_HUMAN
8 PsiBlast_PDB 79.03100% -97 - C1 -2OXM 7.6 UNG_HUMAN
4 PsiBlast_PDB 74.68100% -98 - C1 -1EMJ 9.0 UNG_HUMAN
17 PsiBlast_PDB 71.8999% -97 - C1 -4SKN 9.3 UNG_HUMAN
18 PsiBlast_PDB 49.4375% -89 - C1 -1OKB 3.2 ?
22 PsiBlast_CBE 45.7275% -89 - C1 -1OKB 3.1 ?
20 PsiBlast_PDB 18.2457% -98 - C1 -3UF7 5.5 UNG_ECOLI