@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF05406_PARP3_HUMAN: (2014-10-09 )
MAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGTQVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKINHFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1VD_A_2(4L7O)
?
[Raw transfer]



1VB_A_2(4L7N)
?
[Raw transfer]



1VC_A_2(4L7U)
?
[Raw transfer]



MEJ_A_2(4GV4)
PARP3_HUMAN
[Raw transfer]



8ME_A_2(4GV0)
PARP3_HUMAN
[Raw transfer]



1V9_A_2(4L70)
?
[Raw transfer]



1DC_A_2(4L6Z)
?
[Raw transfer]



5ME_A_2(4GV2)
PARP3_HUMAN
[Raw transfer]



1VA_A_2(4L7L)
?
[Raw transfer]



M00_A_2(4L7R)
?
[Raw transfer]



KU8_A_2(3C49)
PARP3_HUMAN
[Raw transfer]



M95_A_2(4L7P)
?
[Raw transfer]



GAB_A_2(3FHB)
PARP3_HUMAN
[Raw transfer]



P34_A_2(3CE0)
PARP3_HUMAN
[Raw transfer]



78P_A_2(2RD6)

[Raw transfer]



DRL_A_2(3C4H)
PARP3_HUMAN
[Raw transfer]



DMS_A_3(4GV0)
PARP3_HUMAN
[Raw transfer]



DMS_A_3(4L7O)
?
[Raw transfer]



DMS_A_3(4L6Z)
?
[Raw transfer]



DMS_A_3(3C4H)
PARP3_HUMAN
[Raw transfer]



DMS_A_3(4GV2)
PARP3_HUMAN
[Raw transfer]



DMS_A_3(4L70)
?
[Raw transfer]



DMS_A_3(4L7L)
?
[Raw transfer]



DMS_A_3(4GV4)
PARP3_HUMAN
[Raw transfer]
2 PsiBlast_PDB 95.85100% -92 - C1 -3C4H 5.0 PARP3_HUMAN
1 PsiBlast_PDB 95.33100% -96 - C1 -3C49 8.1 PARP3_HUMAN
8 PsiBlast_PDB 95.08100% -94 - C1 -4L6Z 7.3 ?
11 PsiBlast_PDB 95.06100% -93 - C1 -4L7N 7.6 ?
15 PsiBlast_PDB 95.01100% -97 - C1 -4L7U 7.1 ?
9 PsiBlast_PDB 94.69100% -91 - C1 -4L70 7.9 ?
13 PsiBlast_PDB 94.63100% -96 - C1 -4L7P 6.9 ?
14 PsiBlast_PDB 94.36100% -93 - C1 -4L7R 6.4 ?
6 PsiBlast_PDB 94.27100% -91 - C1 -4GV2 7.5 PARP3_HUMAN
5 PsiBlast_PDB 94.12100% -90 - C1 -4GV0 7.3 PARP3_HUMAN
10 PsiBlast_PDB 93.71100% -92 - C1 -4L7L 6.9 ?
4 PsiBlast_PDB 93.69100% -92 - C1 -3FHB 4.1 PARP3_HUMAN
7 PsiBlast_PDB 93.65100% -89 - C1 -4GV4 7.8 PARP3_HUMAN
12 PsiBlast_PDB 93.07100% -92 - C1 -4L7O 9.3 ?
3 PsiBlast_PDB 92.68100% -92 - C1 -3CE0 5.5 PARP3_HUMAN
20 PsiBlast_PDB 61.2036% -86 - C1 -2RD6 6.0