@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF05652_DCPS_HUMAN: (2014-10-10 )
MADAAPQLGKRKRELDVEEAHAASTEEKEAGVGNGTCAPVRLPFSGFRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLNDVKTTVVYPATEKHLQKYLRQDLRLIRETGDDYRNITLPHLESQSLSIQWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVERAHLLAEVIENLECDPRHYQQRTLTFALRADDPLLKLLQEAQQS

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTG_F_6(1ST0)
DCPS_HUMAN
[Raw transfer]




GTA_F_6(1ST4)
DCPS_HUMAN
[Raw transfer]




GTG_G_7(1ST0)
DCPS_HUMAN
[Raw transfer]




M7G_I_9(1XMM)
DCPS_HUMAN
[Raw transfer]




GTA_G_7(1ST4)
DCPS_HUMAN
[Raw transfer]




M7G_J_10(1XMM)
DCPS_HUMAN
[Raw transfer]




G7M_L_12(1XMM)
DCPS_HUMAN
[Raw transfer]




DD3_A_3(3BLA)
DCPS_HUMAN
[Raw transfer]




DD3_B_4(3BLA)
DCPS_HUMAN
[Raw transfer]




DD2_A_3(3BL9)
DCPS_HUMAN
[Raw transfer]




DD1_A_3(3BL7)
DCPS_HUMAN
[Raw transfer]




G7M_K_11(1XMM)
DCPS_HUMAN
[Raw transfer]




1 PsiBlast_PDB 98.38100%-137 - C2 -1XMM 3.4 DCPS_HUMAN
3 PsiBlast_PDB 98.3699%-130 - C2 -1ST4 11.5 DCPS_HUMAN
2 PsiBlast_PDB 98.0899%-126 - C2 -1ST0 9.4 DCPS_HUMAN
27 PsiBlast_CBE 97.1799%-136 - C2 -3BLA 5.0 DCPS_HUMAN
26 PsiBlast_CBE 96.7199%-115 - C2 -1ST0 12.9 DCPS_HUMAN
22 PsiBlast_CBE 96.13100%-132 * C2 *1XMM 4.1 DCPS_HUMAN
25 PsiBlast_CBE 96.0899%-118 - C2 -1ST4 11.9 DCPS_HUMAN
5 PsiBlast_PDB 94.8099%-121 - C2 -3BL9 6.9 DCPS_HUMAN
23 PsiBlast_CBE 93.74100%-120 - C2 -1XMM 8.4 DCPS_HUMAN
21 PsiBlast_CBE 93.65100%-117 - C2 -1XMM 8.5 DCPS_HUMAN
6 PsiBlast_PDB 93.4099%-127 - C2 -3BLA 5.8 DCPS_HUMAN
4 PsiBlast_PDB 93.1599%-122 - C2 -3BL7 6.2 DCPS_HUMAN