@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_DDR1_HUMAN: (2014-10-12 )
MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAARHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPREPPPYQEPRPRGNPPHSAPCVPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STI_B_14(4BKJ)

[Raw transfer]



STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]



0LI_B_7(3ZOS)

[Raw transfer]



0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]



STI_A_5(3PYY)
ABL1_HUMAN
[Raw transfer]



0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]



351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]



B91_A_3(3KFA)
ABL1_MOUSE
[Raw transfer]



T6E_A_2(4AT4)

[Raw transfer]



MUJ_A_2(4AT5)

[Raw transfer]



P3Y_A_3(2QOH)
ABL1_MOUSE
[Raw transfer]



B90_A_3(3KF4)
ABL1_MOUSE
[Raw transfer]



LTI_A_2(4AT3)

[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



EDO_A_13(4BKJ)

[Raw transfer]
3 PsiBlast_PDB 95.83100%-142 - C2 -4BKJ 11.3 DDR1_HUMAN
21 PsiBlast_CBE 94.65100%-142 - C2 -4BKJ 11.0
22 PsiBlast_CBE 94.61100%-136 - C2 -3ZOS 12.1
2 PsiBlast_PDB 94.59100%-139 - C2 -3ZOS 12.1 DDR1_HUMAN
6 PsiBlast_PDB 64.9247%-129 - C2 -4AT5 7.5
5 PsiBlast_PDB 64.7747%-135 - C2 -4AT4 8.7
4 PsiBlast_PDB 63.0647%-131 - C2 -4AT3 5.6
7 PsiBlast_PDB 61.7945%-143 - C2 -3V5Q 10.5 NTRK3_HUMAN
18 PsiBlast_PDB 59.4337%-117 - C2 -3ETA 11.8 INSR_HUMAN
8 PsiBlast_PDB 57.2145%-135 - C2 -4AOJ 7.6 NTRK1_HUMAN
16 PsiBlast_PDB 55.5037%-120 - C2 -3KFA 12.4 ABL1_MOUSE
15 PsiBlast_PDB 55.4937%-127 - C2 -3KF4 9.4 ABL1_MOUSE
14 PsiBlast_PDB 53.4437%-125 - C2 -2QOH 8.2 ABL1_MOUSE
19 PsiBlast_PDB 52.9137%-127 * C2 *3PYY 11.6 ABL1_HUMAN