@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_FAK1_HUMAN: (2014-10-12 )
MAAAYLDPNLNHTPNSSTKTHLGTGMERSPGAMERVLKVFHYFESNSEPTTWASIIRHGDATDVRGIIQKIVDSHKVKHVACYGFRLSHLRSEEVHWLHVDMGVSSVREKYELAHPPEEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKSDYMLEIADQVDQEIALKLGCLEIRRSYWEMRGNALEKKSNYEVLEKDVGLKRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGCNPTHLADFTQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGTSQSFIIRPQKEGERALPSIPKLANSEKQGMRTHAVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEERMRMESRRQATVSWDSGGSDEAPPKPSRPGYPSPRSSEGFYPSPQHMVQTNHYQVSGYPGSHGITAMAGSIYPGQASLLDQTDSWNHRPQEIAMWQPNVEDSTVLDLRGIGQVLPTHLMEERLIRQQQEMEEDQRWLEKEERFLKPDVRLSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPKKPPRPGAPGHLGSLASLSSPADSYNEGVKLQPQEISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLGQTRPH

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(2IJM)
FAK1_HUMAN
[Raw transfer]




ADP_B_2(1MP8)

[Raw transfer]




10N_B_4(4GU6)

[Raw transfer]




BII_A_2(2JKM)

[Raw transfer]




ADP_B_3(2IJM)

[Raw transfer]




PXK_A_3(3PXK)
FAK1_HUMAN
[Raw transfer]




1BQ_A_2(4I4E)

[Raw transfer]




4ST_B_3(2J0M)
?
[Raw transfer]




10N_A_3(4GU6)
FAK1_HUMAN
[Raw transfer]




4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]




KAO_B_5(4KAO)

[Raw transfer]




4ST_A_3(2J0K)
FAK1_CHICK
[Raw transfer]




4ST_B_4(2J0K)
FAK1_CHICK
[Raw transfer]




KAO_A_3(4KAO)
FAK1_HUMAN
[Raw transfer]




VG8_A_2(2JKQ)

[Raw transfer]




YAM_A_2(3BZ3)

[Raw transfer]




BIJ_A_2(2JKO)

[Raw transfer]




BI9_A_3(2JKK)
?
[Raw transfer]




PXK_B_5(3PXK)

[Raw transfer]




7PY_D_4(2ETM)

[Raw transfer]




4GU_A_3(4GU9)
FAK1_HUMAN
[Raw transfer]




4GU_B_4(4GU9)

[Raw transfer]




7PY_C_3(2ETM)
FAK1_HUMAN
[Raw transfer]




K9Y_A_2(4K9Y)

[Raw transfer]




4KA_A_3(4KAB)
FAK1_HUMAN
[Raw transfer]




K8A_A_3(4K8A)
FAK1_HUMAN
[Raw transfer]




4KA_B_4(4KAB)

[Raw transfer]




K8A_B_4(4K8A)

[Raw transfer]




1BR_A_3(4I4F)

[Raw transfer]




0O7_A_2(4EBV)

[Raw transfer]




0PF_A_2(4EBW)

[Raw transfer]




IPA_A_3(4EBV)

[Raw transfer]




2 PsiBlast_PDB 98.5896%-134 - C1 -2J0K 8.0 FAK1_CHICK
1 PsiBlast_PDB 97.8696%-127 - C1 -2J0J 8.0 FAK1_CHICK
21 PsiBlast_CBE 97.3596%-128 - C1 -2J0K 8.9 FAK1_CHICK
15 PsiBlast_PDB 49.90100%-135 - C1 -4KAB 2.9 FAK1_HUMAN
12 PsiBlast_PDB 48.80100%-132 - C1 -4GU9 5.0 FAK1_HUMAN
9 PsiBlast_PDB 48.44100%-129 - C1 -3PXK 4.6 FAK1_HUMAN
32 PsiBlast_CBE 48.4299%-129 - C1 -2J0M 8.0 ?
18 PsiBlast_PDB 48.37100%-126 - C1 -4I4E 6.5
24 PsiBlast_CBE 48.27100%-129 - C1 -4KAO 9.7
26 PsiBlast_CBE 48.22100%-125 - C1 -3PXK 5.3
11 PsiBlast_PDB 48.20100%-129 - C1 -4KAO 9.8 FAK1_HUMAN
25 PsiBlast_CBE 47.84100%-126 - C1 -4GU6 7.4
27 PsiBlast_CBE 47.78100%-126 - C1 -4KAB 2.9
30 PsiBlast_CBE 47.74100%-124 - C1 -4EBV 7.8
22 PsiBlast_CBE 47.73100%-124 - C1 -2IJM 4.9
35 PsiBlast_CBE 47.5198%-124 - C1 -2JKO 8.6
20 PsiBlast_PDB 47.51100%-124 - C1 -4EBW 8.6
31 PsiBlast_CBE 47.4499%-124 - C1 -2JKQ 8.4
16 PsiBlast_PDB 47.36100%-123 - C1 -1MP8 5.6
8 PsiBlast_PDB 47.36100%-121 - C1 -2IJM 4.9 FAK1_HUMAN
33 PsiBlast_CBE 47.2399%-123 * C1 *2JKM 8.2
29 PsiBlast_CBE 47.23100%-127 - C1 -4GU9 4.9
36 PsiBlast_CBE 47.2298%-123 - C1 -2JKK 8.9 ?
13 PsiBlast_PDB 47.17100%-127 - C1 -4K8A 4.2 FAK1_HUMAN
19 PsiBlast_PDB 46.91100%-120 - C1 -3BZ3 8.5
7 PsiBlast_PDB 46.90100%-122 - C1 -2ETM 5.3 FAK1_HUMAN
28 PsiBlast_CBE 46.69100%-121 - C1 -4K8A 4.2
17 PsiBlast_PDB 46.49100%-124 - C1 -4I4F 9.1
23 PsiBlast_CBE 46.45100%-119 - C1 -2ETM 6.0
14 PsiBlast_PDB 45.92100%-119 - C1 -4K9Y 11.3
10 PsiBlast_PDB 45.31100%-116 - C1 -4GU6 7.0 FAK1_HUMAN