@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_JAK3_MOUSE: (2014-10-13 )
MAPPSEETPLIPQRSCSLSSSEAGALHVLLPPRGPGPPQRLSFSFGDYLAEDLCVRAAKACGILPVYHSLFALATEDFSCWFPPSHIFCIEDVDTQVLVYRLRFYFPDWFGLETCHRFGLRKDLTSAILDLHVLEHLFAQHRSDLVSGRLPVGLSMKEQGEFLSLAVLDLAQMAREQAQRPGELLKTVSYKACLPPSLRDVIQGQNFVTRRRIRRTVVLALRRVVACQADRYALMAKYILDLERLHPAATTETFRVGLPGAQEEPGLLRVAGDNGISWSSGDQELFQTFCDFPEIVDVSIKQAPRVGPAGEHRLVTVTRMDGHILEAEFPGLPEALSFVALVDGYFRLICDSRHYFCKEVAPPRLLEEEAELCHGPITLDFAIHKLKAAGSLPGTYILRRSPQDYDSFLLTACVQTPLGPDYKGCLIRQDPSGAFSLVGLSQPHRSLRELLAACWNSGLRVDGAALNLTSCCAPRPKEKSNLIVVRRGCTPAPAPGCSPSCCALTQLSFHTIPTDSLEWHENLGHGSFTKIFRGRRREVVDGETHDSEVLLKVMDSRHRNCMESFLEAASLMSQVSYPHLVLLHGVCMAGDSIMVQEFVYLGAIDMYLRKRGHLVSASWKLQVTKQLAYALNYLEDKGLPHGNVSARKVLLAREGGDGNPPFIKLSDPGVSPTVLSLEMLTDRIPWVAPECLQEAQTLCLEADKWGFGATTWEVFSGGPAHITSLEPAKKLKFYEDQGQLPALKWTELAGLITQCMAYDPGRRPSFRAILRDLNGLITSDYELLSDPTPGIPSPRDELCGGAQLYACQDPAIFEERHLKYISLLGKGNFGSVELCRYDPLGDNTGPLVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLHTDRLLLFAWQICKGMEYLGARRCVHRDLAARNILVESEAHVKIADFGLAKLLPLGKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGPEREGPPLCRLLELLAEGRRLPPPPTCPTEVQELMQLCWAPSPHDRPAFGTLSPQLDALWRGRPG

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

19Q_A_2(4HVG)

[Raw transfer]




1DT_A_3(4I6Q)

[Raw transfer]




933_A_3(4HVD)
?
[Raw transfer]




ADP_A_2(4GVJ)

[Raw transfer]




O19_A_5(4BBF)
JAK2_HUMAN
[Raw transfer]




MI1_A_2(3LXK)

[Raw transfer]




GOL_A_2(4FVP)

[Raw transfer]




19R_A_2(4HVH)

[Raw transfer]




19S_A_2(4HVI)

[Raw transfer]




046_A_2(3UGC)

[Raw transfer]




IZA_A_2(3LXL)

[Raw transfer]




0X5_A_2(4GIH)

[Raw transfer]




3O4_A_5(4BBE)
JAK2_HUMAN
[Raw transfer]




0XH_A_2(4GJ2)

[Raw transfer]




0XP_A_2(4GJ3)

[Raw transfer]




0X6_A_2(4GII)

[Raw transfer]




IZA_A_2(3NZ0)

[Raw transfer]




4 PsiBlast_PDB 88.0189%-110 - C1 -4HVG 5.8
6 PsiBlast_PDB 84.3589%-113 - C1 -4HVI 6.6
7 PsiBlast_PDB 83.5289%-110 - C1 -4I6Q 6.7
5 PsiBlast_PDB 82.7789%-112 - C1 -4HVH 5.7
2 PsiBlast_PDB 82.3689%-108 - C1 -3LXL 7.6
3 PsiBlast_PDB 81.4589%-109 - C1 -4HVD 6.3 ?
1 PsiBlast_PDB 75.6589%-107 - C1 -3LXK 6.7
10 PsiBlast_PDB 72.7659%-109 * C1 *4BBF 8.3 JAK2_HUMAN
9 PsiBlast_PDB 66.0659%-108 - C1 -4BBE 7.9 JAK2_HUMAN
11 PsiBlast_PDB 54.6559%-105 - C1 -3UGC 12.0
20 PsiBlast_PDB 50.9950%-110 - C1 -3NZ0 8.1
16 PsiBlast_PDB 49.8650%-100 - C1 -4GII 6.2
15 PsiBlast_PDB 49.1151%-103 - C1 -4GVJ 6.0
17 PsiBlast_PDB 48.2450%-100 - C1 -4GJ2 5.9
19 PsiBlast_PDB 48.0950% -99 - C1 -4GIH 5.9
18 PsiBlast_PDB 47.7150% -99 - C1 -4GJ3 6.1
13 PsiBlast_PDB 6.0656% -89 - C1 -4FVP 3.9